Job Description P56979 Confidence 7.86% Date Thu Jan 5 12:06:28 GMT 2012 Rank 52 Aligned Residues 107 % Identity 13% Template c2b9sA_ PDB info PDB header:isomerase/dna Chain: A: PDB Molecule:topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex Resolution 2.27 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.												.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		H	M	L	F	A	T	L	W	N	T	G	M	R	I	G	E	.	.	.	.	.	.	.	.	.	.	.	A	R	M	L	T	P	E	S	F	D	L	D	G	.	V	R	P	F	V	R	I	L	S	E	K	V	R	A	R	R	G	R	P	P	K	D	E	V	R	L	V	P	L	T	D	I	S	Y	V	R	Q	M	E
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.														.																	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.
Template Sequence		A	V	A	M	Y	F	I	D	R	L	A	L	R	V	G	N	E	K	G	E	D	E	A	D	T	V	G	C	C	S	L	R	V	E	H	I	Q	L	M	P	D	N	I	V	R	F	D	F	L	G	K	D	S	I	R	Y	Q	.	.	.	.	.	.	.	.	.	N	D	V	A	V	L	P	E	V	Y	A	L	L	Q
Template Known Secondary structure																					T	T	S						G	G	G		B	G	G	G					T	T	S									G	G	G					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.	.	.	370	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		S	W	M	I	T	T	R	P	R	R	R	E	P	L	W	A	V	T	D	E	T	M	R	N	W	L	K	Q	A	V	R	R	A	E	A	D	G	V	H	F	S	I	P	V	T	P	H	T	F	R	H	S	Y	I	M	H	M	L	Y	H
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		R	F	T	R	R	K	S	P	G	M	D	I	F	.	.	.	.	.	.	.	.	D	Q	L	N	P	T	Q	L	N	D	H	L	K	S	F	M	.	.	.	.	D	G	L	S	A	K	V	F	R	T	Y	N	A	S	I	T	L	D	R
Template Known Secondary structure					T	T			T	T	S	B	T	T	.	.	.	.	.	.	.	.	T	T											T	T	T	S	.	.	.	.	T	T			T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.									.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions