Job Description P56979 Confidence 99.87% Date Thu Jan 5 12:06:28 GMT 2012 Rank 10 Aligned Residues 193 % Identity 20% Template c1a0pA_ PDB info PDB header:dna recombination Chain: A: PDB Molecule:site-specific recombinase xerd; PDBTitle: site-specific recombinase, xerd Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		F	A	T	A	L	S	L	R	R	M	A	T	S	T	G	A	T	P	A	Y	L	L	A	P	E	V	S	A	L	L	F	Y	M	P	.	.	.	.	.	D	Q	R	H	H	M	L	F	A	T	L	W	N	T	G	M	R	I	G	E	A	R	M	L	T	P	E	S	F	D	L	D	G	V	R	P	F	V	R	I	L
Query Conservation																																				.	.	.	.	.
Alig confidence																																				.	.	.	.	.
Template Conservation
Template Sequence		F	Q	Y	L	Y	R	E	K	F	R	E	D	D	P	S	A	H	L	K	D	L	S	E	A	Q	V	E	R	L	L	Q	A	P	L	I	D	Q	P	L	E	L	R	D	K	A	M	L	E	V	L	Y	A	T	G	L	R	V	S	E	L	V	G	L	T	M	S	D	I	S	L	R	Q	G	V	V	R	V	I	G	K
Template Known Secondary structure								T	T	S	S	S	S		T	T	S																	S		T	T	S																								T	T		B	G	G	G			T	T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	K	V	R	A	R	R	G	R	P	P	K	D	E	V	R	L	V	P	L	T	D	I	S	Y	V	R	Q	M	E	S	W	M	I	T	T	R	P	R	R	R	E	P	L	W	A	V	T	D	E	T	M	R	N	W	L	K	Q	A	V	R	R	A	E	A	D	G	V	H	F	S	I	P	V	T	P	H	T	F
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		G	N	K	E	R	L	V	P	.	.	.	.	.	.	L	G	E	E	A	V	Y	W	L	E	T	Y	L	E	H	G	R	P	W	L	L	N	G	V	S	I	D	V	L	F	P	S	Q	R	A	Q	Q	M	T	R	Q	T	F	W	H	R	I	K	H	Y	A	V	L	A	G	I	D	S	E	K	L	S	P	H	V	L
Template Known Secondary structure		S	S							.	.	.	.	.	.																T						T	T					B	S	S	B		T	T	S	S	B																	T	T			G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	S	Y	I	M	H	M	L	Y	H	R	Q	P	R	K	V	I	Q	A	L	A	G	H	R	D	P	R	S	M	E	V	Y	T	R	V	F	A	L	D	M	A	A	T	L	A
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		R	H	A	F	A	T	H	L	L	N	H	G	A	D	L	R	V	V	Q	M	L	L	S	D	L	S	.	.	T	T	Q	I	Y	T	H	V	A	T	E	R	L	R	Q	L	H	Q
Template Known Secondary structure														S	S		G	G	G	S	S							.	.
Template Predicted Secondary structure																												.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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