Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE58
Confidence25.34%DateWed Jan 25 15:20:30 GMT 2012
Rank18Aligned Residues46
% Identity11%Templated2d1ha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50
Predicted Secondary structure 















Query SS confidence 













































Query Sequence  YVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILS
Query Conservation 
  




 

 


 
 




 


 

 

 


  




 
Alig confidence 













































Template Conservation    

     


  
         


  
 

 



  
  
  
Template Sequence  YKITDTDVAVLLKXVEIEKPITSEELADIFKLSKTTVENSLKKLIE
Template Known Secondary structure  T


S
T

Template Predicted Secondary structure 











Template SS confidence 













































   17..20.........30.........40.........50.........60..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions