Job Description P29744 Confidence 99.97% Date Thu Jan 5 11:45:40 GMT 2012 Rank 5 Aligned Residues 194 % Identity 24% Template c3pwxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:putative flagellar hook-associated protein; PDBTitle: structure of putative flagellar hook-associated protein from vibrio2 parahaemolyticus Resolution 2.50 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	I	A	A	S	Q	A	V	V	L	S	Q	A	Q	A	Q	N	S	Q	Y	T	L	A	R	T	F	A	T	Q	K	V	S	L	E	E	S	V	L	S	Q	V	T	T	A	I	Q	N	A	Q	E	K	I	V	Y	A	S	N	G	T	L	S	D	D	D	R	A	S	L	A	T	D	I	Q	G	L	R	D	Q	L
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	P	X	A	S	I	K	L	L	N	L	E	R	E	N	S	A	I	A	Q	Y	Q	S	N	I	A	N	L	K	T	T	L	S	S	Q	E	T	H	L	D	S	V	S	E	S	L	K	S	X	R	D	I	V	L	W	G	X	I	T	.	.	.	.	.	.	.	.	.	.	.	.	E	L	K	S	Y	R	D	S	I
Template Known Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	A	N	T	T	D	G	N	G	R	Y	I	F	A	G	Y	K	T	E	T	A	P	F	S	E	E	K	G	K	Y	V	G	G	A	E	S	I	K	Q	Q	V	D	A	S	R	S	M	V	I	G	H	T	G	D	K	I	F	D	S	I	T	S	N	A	V	A	E	P	D	G	S	A	S	E	T	N	L	F
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	S	F	N	A	Q	D	E	E	G	H	F	L	F	S	G	T	K	T	Y	V	V	E	G	.	.	.	.	.	.	.	.	.	N	S	D	V	R	V	V	T	V	A	K	G	V	T	X	D	S	N	X	T	A	Q	E	I	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	N	V	L
Template Known Secondary structure						T		B		S	S	S		B	T	T	S	T	T							S	.	.	.	.	.	.	.	.	.											T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.										.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	L	D	S	A	I	A	A	L	K	T	P	V	A	D	S	E	A	D	K	E	T	A	A	A	A	L	D	K	T	N	R	G	L	K	N	S	L	N	N	V	L	T	V	R	A	E	L	G	T	Q	L	N	E	L	E	S	L	D	S	L	G	S	D	R	A	L	G	Q	T	Q	Q	M	S	D	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		N	Q	I	D	A	L	I	A	E	F	E	K	P	S	P	.	.	.	.	.	.	.	N	F	Q	A	E	V	D	A	S	L	N	A	I	D	D	T	X	A	N	V	L	G	A	X	T	E	I	G	G	R	H	N	N	L	D	L	X	D	G	A	H	S	E	N	K	L	F	V	D	K	V	S	G	D	L
Template Known Secondary structure				T									S			T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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