Job Description P29744 Confidence 8.55% Date Thu Jan 5 11:45:40 GMT 2012 Rank 11 Aligned Residues 76 % Identity 12% Template c2ieqC_ PDB info PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein Resolution 1.75 Å

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	T	N	R	G	L	K	N	S	L	N	N	V	L	T	V	R	A	E	L	G	T	Q	L	N	E	L	E	S	L	D	S	L	G	S	D	R	A	L	G	Q	T	Q	Q	M	S	D	L	V	D	V	D	W	N	A	T	I	S	S	Y	I	M	Q	Q	T	A	L	Q	A	S	Y	K	A	F	T	D	M	Q
Query Conservation
Alig confidence																																																	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		I	V	A	S	F	S	S	V	N	D	A	I	T	Q	T	A	E	A	I	H	T	V	T	I	A	L	N	K	I	Q	D	V	V	N	Q	Q	G	S	A	L	N	H	L	T	S	Q	L	.	.	.	.	.	.	T	Y	L	N	L	S	S	E	L	K	Q	L	E	A	K	T	A	S	L	F	Q	T	T	V	E	L	Q
Template Known Secondary structure																																																	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		309	310
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		97	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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