Job Description P0AFA5 Confidence 99.87% Date Thu Jan 5 11:25:44 GMT 2012 Rank 10 Aligned Residues 227 % Identity 8% Template d1qg8a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Spore coat polysaccharide biosynthesis protein SpsA Resolution 1.50

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.
Query Sequence		K	P	L	A	I	M	V	P	A	W	N	E	T	G	V	I	G	N	M	A	E	L	A	A	T	T	L	D	Y	E	N	Y	H	I	F	V	G	T	Y	P	N	D	P	D	T	Q	R	D	V	D	E	V	C	A	R	F	P	N	V	H	K	V	V	C	A	R	P	.	.	.	.	.	G	P	T	S	K	A	D	C
Query Conservation																																																																					.	.	.	.	.
Alig confidence																								.																																													.	.	.	.	.
Template Conservation																								.
Template Sequence		P	K	V	S	V	I	M	T	S	Y	N	K	S	D	Y	V	A	K	S	I	S	S	.	I	L	S	Q	T	F	S	D	F	E	L	F	I	M	D	D	N	S	N	E	E	T	L	N	V	I	R	P	F	L	N	D	N	R	V	R	F	Y	Q	S	D	I	S	G	V	K	E	R	T	E	K	T	R	Y	A	A	L
Template Known Secondary structure											S	S		T	T	T								.			T		S												S										G	G	G	G	G	S	T	T										S						S	S
Template Predicted Secondary structure																								.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																																							.	.	.
Query SS confidence																																							.	.	.
Query Sequence		L	N	N	V	L	D	A	I	T	Q	F	E	R	S	A	N	F	A	F	A	G	F	I	L	H	D	A	E	D	V	I	S	P	M	E	L	R	.	.	.	L	F	N	Y	L	V	E	R	K	D	L	I	Q	I	P	V	Y	P	F	E	R	E	W	T	H	F	T	S	M	T	Y	I	D	E	F	S	E	L	H	G
Query Conservation																																							.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																		.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	Q	A	I	E	M	A	E	G	E	.	.	.	.	.	.	.	.	.	Y	I	T	Y	A	T	D	D	N	I	Y	M	P	D	R	L	L	K	M	V	R	E	L	D	T	H	P	E	K	A	V	I	Y	S	A	S	K	T	Y	H	L	N	D	I	V	K	E	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S	.	.	.	.	.	.	.	.	.							T	T					T	T													T	T																					.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.										.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		K	D	V	P	V	R	E	A	L	A	G	Q	V	P	S	A	G	V	G	T	C	F	S	R	R	A	V	T	A	L	L	A	D	G	D	G	I	A	F	D	V	.	.	.	Q	S	L	T	E	D	Y	D	I	G	F	R	L	K	E	K	G	M	T	E	I	F	V	R	F	P	V	V	D	E	A	K	E	R	E	Q
Query Conservation																																											.	.	.
Alig confidence																																					.						.	.	.														.
Template Conservation																																					.																						.
Template Sequence		V	R	P	A	A	Q	V	T	W	N	A	P	C	A	I	D	H	C	S	V	M	H	R	Y	S	V	L	E	K	V	K	E	K	F	G	.	S	Y	W	D	E	S	P	A	F	Y	R	I	G	D	A	R	F	F	W	R	V	.	N	H	F	Y	P	F	Y	P	L	D	E	E	L	D	L	N	Y	I	T	E	F	V
Template Known Secondary structure							S		B	S			T	T	T	S		G	G	G					T											S	.	S	S	S				G	G	G	S	T	T										.	T	T	T			B															T	G
Template Predicted Secondary structure																																					.																						.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	F	L	Q	H	A	R	T	S	N	M	I	C	V	R	E	Y	F	P	D	T	F	S	T	A	V	R	Q	K	S	R	W	I	I	G
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	L	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	N	C	R	E	L	R	E	S	L	K	K	L	G	M	G
Template Known Secondary structure		G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.															T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.															240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions