 |
Job Description | P0AFA5 | Confidence | 30.93% | Date | Thu Jan 5 11:25:44 GMT 2012 |
Rank | 41 | Aligned Residues | 46 |
% Identity | 22% | Template | c3kvhA_ |
PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:protein syndesmos; |
PDBTitle: crystal structure of human protein syndesmos (nudt16-like protein)
|
Resolution | 1.70 Å |
|
  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | |
|
. | . | . | . | . | . | . | . | . | 520 | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | P | S | V | T | G | D | T | R | S | L | R | P | L | G | Q | I | L | L | E | N | Q | V | I | T | E | E | Q | L | D | T | A | L | R | . |
. |
N | R | V | E | G | L | R | L | G | G | S | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |
|
|
|   |   |
|
|   | . | . |
|
|   |   |
|   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |   |
|
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
Template Sequence |   |
F | L | S | N | A | F | V | S | T | A | K | C | Q | L | L | F | A | L | K | V | L | N | M | M | P | E | E | K | L | V | E | A | L | A | A | A | T | E | K | Q | K | K | A | L | E | K | L | L |
Template Known Secondary structure |   |
 |  | T | S |
| B |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|