Job Description P0AFA5 Confidence 37.04% Date Thu Jan 5 11:25:44 GMT 2012 Rank 37 Aligned Residues 68 % Identity 16% Template c2xzmD_ PDB info PDB header:ribosome Chain: D: PDB Molecule:ribosomal protein s4 containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.			.	.	.	.	.	510	.	.	.	.				.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure																													.	.											.	.	.
Query SS confidence																													.	.											.	.	.
Query Sequence		P	S	V	T	G	D	T	R	S	L	R	P	L	G	Q	I	L	L	E	N	Q	V	I	T	E	E	Q	.	.	L	D	T	A	L	R	N	R	V	E	.	.	.	G	L	R	L	G	G	S	M	L	M	Q	G	L	I	S	A	E	Q	L	A	Q	A	L	A	E	Q	N	G	V	A	W
Query Conservation																													.	.											.	.	.
Alig confidence																													.	.											.	.	.
Template Conservation
Template Sequence		P	K	D	P	R	R	L	F	E	G	S	A	L	L	R	R	M	F	K	Y	G	L	L	S	E	Q	E	R	K	L	D	Y	V	L	G	L	T	I	H	K	L	M	E	R	R	L	Q	T	R	V	F	K	L	N	L	A	N	S	I	H	H	S	R	V	L	I	R	Q	R	H	I	K	V
Template Known Secondary structure		T	T																		T	T	S	S		T	T			S	T					S								T	T	B								T	T		S	S	S	T	T						T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions