Job Description P0AFA5 Confidence 83.34% Date Thu Jan 5 11:25:44 GMT 2012 Rank 24 Aligned Residues 168 % Identity 7% Template c2oaq1_ PDB info PDB header:hydrolase Chain: 1: PDB Molecule:type ii secretion system protein; PDBTitle: crystal structure of the archaeal secretion atpase gspe in complex2 with phosphate Resolution 3.15 Å

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		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.		.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		N	G	V	A	W	E	S	I	D	A	W	Q	I	P	S	S	L	I	A	E	M	P	A	S	V	A	L	H	Y	A	V	L	P	L	R	L	E	N	D	E	L	I	V	G	S	E	D	G	.	I	D	P	V	S	L	A	A	L	T	R	K	V	G	R	K	V	R	Y	V	I	V	L	R	G	Q	I	V	T	G	L
Query Conservation																																																		.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	S	G	S	R	I	V	E	E	Y	W	I	Q	E	P	F	T	.	.	.	.	.	.	.	.	.	.	K	A	I	I	V	E	N	E	D	E	F	R	N	V	Y	Y	A	L	E	P	T	V	S	S	E	E	A	E	V	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	L	Y	D	D	L
Template Known Secondary structure				T	T											T	T	T		.	.	.	.	.	.	.	.	.	.								S	S	S																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.																.	.	.	.	.	.	.
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.		.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		R	H	W	Y	A	R	R	R	G	H	D	P	R	A	M	L	Y	N	A	V	Q	H	Q	W	L	T	E	Q	Q	A	G	E	I	W	R	Q	Y	.	V	P	H	Q	F	L	F	A	E	I	L	T	T	L	G	H	I	N	R	S	A	I	N	V	L	L	L	R	H	E	R	S	S	L	P	L	G	K	F	L	V	T
Query Conservation																																							.
Alig confidence																																							.																																									.	.
Template Conservation																																																																																.	.
Template Sequence		K	K	I	L	V	L	Q	D	V	S	V	D	L	E	E	R	A	E	V	L	V	R	A	I	E	K	T	D	N	F	Y	S	R	X	L	Y	Y	L	F	R	D	F	F	G	Y	G	L	I	D	P	L	X	E	D	T	N	V	E	D	I	S	C	D	G	Y	N	I	P	I	F	I	Y	H	Q	K	Y	G	N	.	.
Template Known Secondary structure		T	T							T	T	S																	T	T	T	T										T	T	T	S		G	G	G							T	T								S	T	T								T	T	T			.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		699	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	V	I	S	Q	E	T	L	D	R	V	L	T	I	Q	R	E	L	Q	V	S	M	Q	S	L	L	L	K	A	G	L	N	T	E	Q	V	A	Q	L	E	S	E	N	E	G	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																						.	.
Template Conservation		.	.	.	.	.	.	.	.																						.	.
Template Sequence		.	.	.	.	.	.	.	.	V	E	T	N	I	V	L	D	Q	E	K	L	D	R	X	V	L	R	L	T	Q	.	.	R	S	G	K	H	I	S	I	A	N	P	I	V	D	A	T
Template Known Secondary structure		.	.	.	.	.	.	.	.				S																		.	.		T	T				B	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																						.	.
Template SS confidence
										166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions