Job Description P0AFA5 Confidence 56.22% Date Thu Jan 5 11:25:44 GMT 2012 Rank 30 Aligned Residues 118 % Identity 12% Template c2gamA_ PDB info PDB header:transferase Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase; PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		P	L	A	I	M	V	P	A	W	N	E	T	G	V	I	G	N	M	A	E	L	A	A	T	T	L	D	Y	E	.	N	Y	H	I	F	V	G	T	Y	P	N	D	P	D	T	Q	R	D	V	D	E	V	C	A	R	F	P	N	V	H	K	V	V	C	A	R	P	G	P	T	S	K	A	D	C	L	N	N	V	L
Query Conservation																															.
Alig confidence																					.		.	.	.						.
Template Conservation																					.		.	.	.
Template Sequence		P	I	A	Y	S	I	V	V	H	H	K	I	E	M	L	D	R	L	L	.	R	.	.	.	A	I	Y	M	P	Q	N	F	Y	C	I	H	V	D	R	K	A	E	E	S	F	L	A	A	V	Q	G	I	A	S	C	F	D	N	V	F	V	A	S	Q	L	E	S	V	V	Y	A	S	W	T	R	V	K	A	D	L
Template Known Secondary structure										S	S										.		.	.	.					T	T	S								T	T	S														T		T	T					S	S						T	T	S
Template Predicted Secondary structure																					.		.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		D	A	I	T	Q	F	E	R	S	A	N	F	A	F	A	G	F	I	L	H	D	A	E	D	V	I	.	.	S	P	M	E	L	R	L	F	N	Y	L	V	E	R	K	D	L	I
Query Conservation																												.	.
Alig confidence												.																.	.
Template Conservation												.
Template Sequence		N	C	M	K	D	L	Y	R	M	N	.	A	N	W	K	Y	L	I	N	L	C	G	M	D	F	P	I	K	T	N	L	E	I	V	R	K	L	K	C	S	T	G	E	N	N	L
Template Known Secondary structure												.	S										T	T				S	S												T	T	T
Template Predicted Secondary structure												.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions