Job Description P0AFA5 Confidence 99.94% Date Thu Jan 5 11:25:44 GMT 2012 Rank 6 Aligned Residues 208 % Identity 14% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																			.																				.	.															.
Query SS confidence																			.																				.	.															.
Query Sequence		K	P	D	E	K	P	L	A	I	M	V	P	A	W	N	E	T	.	G	V	I	G	N	M	A	E	L	A	A	T	T	L	D	Y	E	N	Y	.	.	H	I	F	V	G	T	Y	P	N	D	P	D	T	Q	.	R	D	V	D	E	V	C	A	R	F	P	N	V	H	K	V	V	C	A	R	P	G	P	T	S	K
Query Conservation																			.																				.	.															.
Alig confidence																			.														.						.	.															.																		.	.
Template Conservation																																	.																																								.	.
Template Sequence		L	E	T	L	P	N	T	S	I	I	I	P	F	H	N	E	G	W	S	S	L	L	R	T	V	H	S	V	L	N	R	.	S	P	P	E	L	V	A	E	I	V	L	V	D	D	F	S	D	R	E	H	L	K	K	P	L	E	D	Y	M	A	L	F	P	S	V	R	I	L	R	.	.	T	K	K	R	E	G	L
Template Known Secondary structure			S	S											S	S																	.	S		G	G	G										S				G	G	G	T								T	T	S	T	T						.	.		S	S
Template Predicted Secondary structure																																	.																																								.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		A	D	C	L	N	N	V	L	D	A	I	T	Q	F	E	R	S	A	N	F	A	F	A	G	F	I	L	H	D	A	E	D	V	I	S	P	M	E	L	R	.	.	L	F	N	Y	L	V	E	R	K	D	L	I	Q	I	P	V	Y	P	F	E	R	E	W	T	H	F	T	S	M	T	Y	I	D	E	F	S	E	L
Query Conservation																																										.	.
Alig confidence																.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		I	R	T	R	M	L	G	A	S	V	A	T	G	D	.	.	.	.	.	.	.	.	.	V	I	T	F	L	D	S	H	C	E	A	N	V	N	W	L	P	P	L	L	D	R	I	A	R	N	R	K	T	I	V	C	P	M	I	D	V	I	D	H	D	D	F	R	Y	E	T	Q	A	G	D	A	M	R	G	A	F
Template Known Secondary structure														S	S	.	.	.	.	.	.	.	.	.							S	S					T	T		S											T	T												T	T	T							T	T	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.										.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.													.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Query Sequence		H	G	K	D	V	P	V	R	E	A	L	A	G	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	P	S	A	G	V	G	T	C	F	S	R	R	A	V	T	A	L	L	A	D	G	D	G	I	A	F	D	V	Q	S	L	.	.	.	T	E	D	Y	D	I	G	F	R	L	K	E	K	G	M	T	E	I	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.									.	.	.
Template Conservation																																														.	.	.	.	.	.
Template Sequence		D	W	E	M	Y	Y	K	R	I	P	I	P	P	E	L	Q	K	A	D	P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	L	.	.	.	.	.	.	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W	M	C	G	G	R	M	E	D
Template Known Secondary structure			T	T										T	T	T			S	S	T	T	S					S	S			S	S	S											T	.	.	.	.	.	.	T	S	S		T	T			S	S	S	S												T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.							.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		284	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	F	P	V	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	C	S	R	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions