Job Description P0AFA5 Confidence 99.79% Date Thu Jan 5 11:25:44 GMT 2012 Rank 11 Aligned Residues 211 % Identity 11% Template c1omxB_ PDB info PDB header:transferase Chain: B: PDB Molecule:alpha-1,4-n-acetylhexosaminyltransferase extl2; PDBTitle: crystal structure of mouse alpha-1,4-n-2 acetylhexosaminyltransferase (extl2) Resolution 2.40 Å

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		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	L	A	I	M	V	P	A	W	N	E	T	G	V	I	G	N	M	A	E	L	A	A	T	T	L	D	Y	E	N	Y	H	I	F	V	G	T	Y	P	N	D	P	D	T	Q	R	D	V	D	E	V	C	A	R	F	P	N	V	H	K	V	V	C	A	R	P	G	P	T	S	K	A	D	C	L	N	N	V	L
Query Conservation
Alig confidence																								.																																								.	.	.	.
Template Conservation																								.																																								.	.	.	.
Template Sequence		D	S	F	T	L	I	M	Q	T	Y	N	R	T	D	L	L	L	R	L	L	N	H	.	Y	Q	A	V	P	S	L	H	K	V	I	V	V	W	N	N	V	G	E	K	G	P	E	E	L	W	N	S	L	G	P	H	P	I	P	V	I	F	K	.	.	.	.	P	Q	T	A	N	K	M	R	N	R	L	Q	V	F
Template Known Secondary structure		T									S	S												.		T	T	S	T	T											T	T	S			T							T				S	S						.	.	.	.			S	S			S	T	T	T	T	S
Template Predicted Secondary structure																								.																																								.	.	.	.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		D	A	I	T	Q	F	E	R	S	A	N	F	A	F	A	G	F	I	L	H	D	A	E	D	V	I	S	P	M	E	L	R	.	.	.	L	F	N	Y	L	V	E	R	K	D	L	I	Q	I	P	V	Y	P	F	E	R	E	W	T	H	F	T	S	M	T	Y	I	D	E	F	S	E	L	H	G	K	D	V	P	V
Query Conservation																																		.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																		.	.	.																														.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Sequence		P	E	V	E	T	N	.	.	.	.	.	.	.	.	.	A	V	L	M	V	D	D	D	T	L	I	S	A	Q	D	L	V	F	A	F	S	I	W	Q	Q	F	P	D	Q	I	I	G	F	V	P	R	K	H	V	S	T	S	S	G	I	Y	S	Y	G	.	.	.	.	.	.	.	.	G	F	E	L	Q	T	P	G
Template Known Secondary structure		T	T			S	S	.	.	.	.	.	.	.	.	.							T	T																		S	T	T	S				S										T	T						.	.	.	.	.	.	.	.		T	T	S			S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.										.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.									.	.	.	.	.	200	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260									.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		R	E	A	L	A	G	Q	V	P	S	A	G	V	G	T	C	F	S	R	R	A	V	T	A	L	L	A	D	G	D	G	I	A	F	D	.	.	.	.	.	.	.	.	V	Q	S	L	T	E	D	Y	D	I	G	F	R	L	K	E	K	G	M	T	E	I	F	V	R	F	P	V	V	D	E	A	K	E	R	E	Q
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.					.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	N	G	D	Q	Y	S	M	V	L	I	G	A	S	F	F	N	S	K	Y	L	E	L	F	.	.	.	.	.	.	Q	K	Q	P	A	A	V	H	A	L	I	D	E	T	Q	N	C	D	D	I	A	M	N	F	L	V	T	R	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	S	S			B					T	T						T							.	.	.	.	.	.		T	S												T																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.							.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	F	L	Q	H	A	R	T	S	N	M	I	C	V	R	E	Y	F	P	D	T	F	S	T	A	V	R	Q	K	S	R	W	I	I	G	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	G	K	P	S	G	I	F	V	K	P	I	N	M	V	N	L	E	H	F	L	Q	R	S	Y	C	I	N	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	S	S		S							S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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