Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMT7
Confidence8.69%DateThu Jan 5 12:38:12 GMT 2012
Rank8Aligned Residues21
% Identity33%Templatec2pjwV_
PDB info PDB header:endocytosis/exocytosisChain: V: PDB Molecule:vacuolar protein sorting-associated protein 27; PDBTitle: the vps27/hse1 complex is a gat domain-based scaffold for2 ubiquitin-dependent sorting
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90......
Predicted Secondary structure 
Query SS confidence 




















Query Sequence  KYSDYINDYHKIAEGYRFLDD
Query Conservation 

  
   
 



 
 
   
Alig confidence 




















Template Conservation 

  
 

  









 
Template Sequence  KYNTLIEXNGKISEIXNIYDR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




















   406...410.........420......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions