Job Description P46857 Confidence 4.08% Date Thu Jan 5 12:04:29 GMT 2012 Rank 75 Aligned Residues 33 % Identity 18% Template c3njqB_ PDB info PDB header:viral protein/inhibitor Chain: B: PDB Molecule:orf 17; PDBTitle: crystal structure of kaposi's sarcoma-associated herpesvirus protease2 in complex with dimer disruptor Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	V	V	I	T	L	H	G	R	F	S	Q	G	W	Y	F	C	F	E	A	R	E	F	L	E	T	G	D	E	A	A	R	L	A	G	N	A	P	F	I	I	D	K	D	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	I	T	I	E	H	L	P	E	T	E	V	G	W	T	L	G	L	F	Q	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	I	F	C	T	G	A	I	T
Template Known Secondary structure							T	T	B	T	T	B												T	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.														.	.	.	.	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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