Return to main results Retrieve Phyre Job Id

Job DescriptionP64530
Confidence34.49%DateThu Jan 5 12:09:14 GMT 2012
Rank5Aligned Residues67
% Identity15%Templatec3juiA_
PDB info PDB header:translationChain: A: PDB Molecule:translation initiation factor eif-2b subunit epsilon; PDBTitle: crystal structure of the c-terminal domain of human translation2 initiation factor eif2b epsilon subunit
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50 .........60.........70.........80........
Predicted Secondary structure 



....





Query SS confidence 




























. . . .





































Query Sequence  VVALKKMLDEPHECAAVLQQIAAIRGAVN. . . . GLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSY
Query Conservation 
 

 




   
 


 





 

 ....     

  

  

            
 

   
   
Alig confidence 




























....





































Template Conservation     
 
  

    

 







 
 
    

   
  


                       
   
Template Sequence  LGTLQRGKEENISCDNLVLEINSLKYAYNISLKEVXQVLSHVVLEFPLQQXDSPLDSSRYCALLLPLLKAW
Template Known Secondary structure  T

TT

GGGGG

SS

Template Predicted Secondary structure 














Template SS confidence 






































































   558.560.........570.........580.........590.........600.........610.........620........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions