Job Description P64530 Confidence 3.81% Date Thu Jan 5 12:09:14 GMT 2012 Rank 43 Aligned Residues 49 % Identity 6% Template c2gd5B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:charged multivesicular body protein 3; PDBTitle: structural basis for budding by the escrtiii factor chmp3 Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	K	L	K	A	R	A	S	K	I	Q	G	Q	V	V	A	L	K	K	M	L	D	E	P	H	E	C	A	A	V	L	Q	Q	I	A	A	I	R	G	A	V	N	G	L	M	R	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	K	A	V	S	K	L	Y	A	S	K	A	H	X	N	S	V	L	X	G	X	K	N	Q	L	A	V	L	R	V	A	G	S	L	Q	K	S	T	E	V	X	K	A	X	Q	S	L	V
Template Known Secondary structure																																	S	S	S					S									T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions