|   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | |
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20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
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. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
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|
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . |
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|
|  |  |  |  |
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|  |  |
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|
| . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |
Query SS confidence |   |
|
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|
|
|
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|
|
| . |
. |
. |
. |
|
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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|
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|
| . |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
G | N | L | P | A | L | K | A | A | I | E | N | . |
. |
. |
. |
G | A | D | A | V | Y | I | G | L | K | D | D | T | N | A | R | H | F | A | G | L | N | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | E | K | K | L | Q | E | A | V | S | F | V | H | Q | H | R | R | K | L | H | I | A | I | . |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |
|
|   |   |   |
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|   |   |
| . | . | . | . |
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|   |
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|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
| . | . | . | . | . | . | . |
Alig confidence |   |
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| . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . |
Template Conservation |   |
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|   |   |
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|   |   |   |
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|   |   |
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|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
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|   |   |   |
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|   |   |
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|   |   |
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|   |   |
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|   |
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|   |
|   |
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|   |
|   |
Template Sequence |   |
G | T | Y | R | A | A | A | E | K | L | P | Y | L | K | E | L | G | V | T | A | I | Q | V | M | P | L | A | A | F | D | G | Q | R | G | W | G | Y | D | G | A | A | F | Y | A | P | Y | A | P | Y | G | R | P | E | D | L | M | A | L | V | D | A | A | H | R | L | G | L | G | V | F | L | D | V | V | Y | N | H | F | G | P |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
|  |  |
| S | S | S |
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|
| S | T | T |
|
|  |  |  |  |  |
| G | G | G |
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|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
| S |
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|
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |
  |   |
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66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
. | . | . | . | 90 | . | . | . | . | . | . | . | . | |
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. | 100 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
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|  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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| . |
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| . |
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Query Sequence |   |
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N | T | F | A | H | P | D | G | Y | A | R | W | Q | R | A | V | D | M | A | A | . |
Q | L | G | A | D | A | L | I | L | A | D | L | A | . |
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. |
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. |
M | L | E | Y | A | A | E | R | Y |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   | . |   |   |
|   |
|   |
|
|
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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| . |
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
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|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | G | N | Y | L | S | S | Y | A | P | S | Y | F | T | D | R | F | S | S | A | W | G | M | G | L | D | Y | A | E | P | H | M | R | R | Y | V | T | G | N | A | R | M | W | L | R | D | Y | H | F | D | G | L | R | L | D | A | T | P | Y | M | T | D | D | S | E | T | H | I | L | T | E | L | A | Q | E | I | H | E | L | G |
Template Known Secondary structure |   |
S | S |
|
|  |  |  |  |
| G | G | G |  |  |  |  |  |  |
| S | S | S |  |  |  |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  | T | T | G | G | G |
|
|
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
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|
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|
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 |
  |
  |   |
108 | . | 110 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
P | H | I | E | R | H | V |
Query Conservation |   |
  |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
Template Sequence |   |
G | T | H | L | L | L | A |
Template Known Secondary structure |   |
S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
301 | . | . | . | . | . | . |
  |