Return to main results Retrieve Phyre Job Id

Job DescriptionP45527
Confidence89.90%DateThu Jan 5 12:02:54 GMT 2012
Rank233Aligned Residues107
% Identity15%Templated2bhua3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10......... 20.........30.........40.. .......50.........60.....
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Query Sequence  GNLPALKAAIEN. . . . GADAVYIGLKDDTNARHFAGLNF. . . . . . . . . . . TEKKLQEAVSFVHQHRRKLHIAI. . . . . . .
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Template Sequence  GTYRAAAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGP
Template Known Secondary structure 
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   141........150.........160.........170.........180.........190.........200.........210.........220
 
   66...70.........80..... ....90........ .100.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . NTFAHPDGYARWQRAVDMAA. QLGADALILADLA. . . . . . . . . . . . . MLEYAAERY
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Template Sequence  SGNYLSSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFDGLRLDATPYMTDDSETHILTELAQEIHELG
Template Known Secondary structure  SS


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   221........230.........240.........250.........260.........270.........280.........290.........300
 
   108.110....
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Query Sequence  PHIERHV
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Template Conservation         
Template Sequence  GTHLLLA
Template Known Secondary structure  S

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   301......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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