Job Description P45527 Confidence 76.42% Date Thu Jan 5 12:02:54 GMT 2012 Rank 395 Aligned Residues 169 % Identity 16% Template d1vfsa2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 1.90

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																	.	.																					.	.	.	.
Query SS confidence																	.	.																					.	.	.	.
Query Sequence		T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	.	.	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	.	.	.	.	Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V
Query Conservation																	.	.																					.	.	.	.
Alig confidence																	.	.									.	.	.	.	.	.	.						.	.	.	.																																					.	.	.
Template Conservation																											.	.	.	.	.	.	.																																														.	.	.
Template Sequence		D	L	D	A	V	R	A	N	V	R	A	L	R	A	R	A	P	R	S	A	L	M	A	V	V	.	.	.	.	.	.	.	K	S	N	A	Y	G	H	G	A	V	P	C	A	R	A	A	Q	E	A	G	A	A	W	L	G	T	A	T	P	E	E	A	L	E	L	R	A	A	G	I	Q	G	R	I	M	.	.	.
Template Known Secondary structure															T	T	S	T	T	S							.	.	.	.	.	.	.						T	T													T							S	S										T	T			S				.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.																																														.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.								.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	S	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	P	R	V	L	S	I	H	Q	V	K	Q	L	A	R	V	T	P	V	P	L	E	V	F	A	F	G	S	L	C	I	M	S	E	G	R	C	Y	L	S	S	Y	L	T	G	E	S	P	N	T	I	G	A	C	S	P	A
Query Conservation
Alig confidence															.						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	W	L	W	T	P	G	G	P	W	R	E	A	.	I	E	T	D	I	.	D	V	S	V	S	G	M	W	A	L	D	E	V	R	A	A	A	R	A	A	G	R	T	A	R	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T							.			T	T		.						S															T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.						.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	V	R	W	Q	Q	T	P	Q	G	L	E	S	R	L	N	E	V	L	I	D	R	Y	Q	D	G	E	N	A	G	Y	P	T	L	C	K	G	R	Y	L	V	D	G	E	R	Y	H	A	L	E	E	P	T	S	L	N	T	L	E	L	L	P	E	L	M	A	A	N	I	A	S	V	K	I	E	G	R	Q	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	T	G	L	G	R	N	G	C	Q	P	A	D	W	A	E	L	V	G	A	A	V	A	A	Q	A	.	.	E	G	T	V	Q	V	T	G	V	W	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S			S	S	S																			.	.	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
																																										130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.
										277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	P	A	Y	V	S	Q	V	A	K	V	W	R	Q	A	I	D	R	C	K	A
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	F	A	C	A	D	E	P	G	H	P	S	I	R	L	Q	L	D	A	F	R	D	M	L	A	Y	A	E	K
Template Known Secondary structure				S	S	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions