 |
Job Description | P45527 | Confidence | 76.40% | Date | Thu Jan 5 12:02:54 GMT 2012 |
Rank | 400 | Aligned Residues | 92 |
% Identity | 17% | Template | d1uuma_ |
SCOP info | TIM beta/alpha-barrel
| FMN-linked oxidoreductases
| FMN-linked oxidoreductases
|
Resolution | 2.3 |
|
 |
  |   |
47 | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
L | Q | E | A | V | S | F | V | H | Q | H | R | R | K | L | H | I | A | I | N | T | F | A | H | P | D | G | Y | A | R | W | Q | R | A | V | D | M | A | A | Q | L | G | A | D | A | L | I | L | A | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
|   |
|
|
Template Sequence |   |
L | Q | E | R | D | A | L | K | G | T | R | K | P | A | V | L | V | K | I | A | P | D | L | T | A | Q | D | K | E | D | I | . |
. |
. |
A | S | V | A | R | E | L | G | I | D | G | L | I | V | T | N | T | T | V | S | R | P | V | G | L | Q | G | A | L | R | S | E | T | G | G | L | S | G | K | P | L | R | D | L | S | T |
Template Known Secondary structure |   |
 |  |  |  |  | T | S | S | S | S |
|
|
|  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|
|
| B | S |
|
|
| T | T |
|
|
| G | G | G | G | S |
| S |  |  |  |  | G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | |
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | M | L | E | Y | A | A | E | R | Y | P | . |
H | I | E | R | H | V | S | V | Q | A | S | A | T | N | E | E | A | I | N | F | Y | H | R | H | F | D | V | A | R | V | V | L | P | R | V | L |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   | . | . |
|
|
|   |   |
|   |
|
|   |   |   |
| . |   |   |
|
|   |   |
|   |
|
|
|
|   |
Template Sequence |   |
Q | T | I | R | E | M | Y | A | L | T | Q | G | R | I | P | I | I | G | V | . |
. |
G | G | V | S | S | G | Q | D | A | L | E | K | I | . |
Q | A | G | A | S | L | V | Q | L | Y | T | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | T |
| S |
|  |  |  |  | . | . | S | S |
|
| S |  |  |  |  |  |  |  |  | . |  |  | T |  |  |  |  |  |  | S |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
315 | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
|
. | . | . | . | . | . | 340 | . | . | . | . | . | . | |
. | . | . | 350 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|