Return to main results Retrieve Phyre Job Id

Job DescriptionP45527
Confidence98.10%DateThu Jan 5 12:02:54 GMT 2012
Rank3Aligned Residues155
% Identity17%Templated1twda_
SCOP infoTIM beta/alpha-barrel CutC-like CutC-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60..... .. ..70.......
Predicted Secondary structure 


























.

....


Query SS confidence 






























































.

. . . .









Query Sequence  LLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAI. NT. . . . FAHPDGYARW
Query Conservation 



 
 

   

  



 

 
       
           
 
        
  
 
 
.
 ....
         
Alig confidence 































.....












...









.

....









Template Conservation 




 
   
  
   







  
  

.....



 
 
     ...   


 





 


 

  
   
Template Sequence  LEICCYSXECALTAQQNGADRVELCAAPKEGG. . . . . LTPSLGVLKSVRQ. . . RVTIPVHPIIRPRGGDFCYSDGEFAAI
Template Known Secondary structure  SSTT
S
B
GGGT
.....B


...

S
B

SSSS
S


Template Predicted Secondary structure 












.....



...












Template SS confidence 















































































   4.....10.........20.........30..... ....40........ .50.........60.........70.....
 
   78.80.........90..... ....100.........110........ .120.........130.........140. ..
Predicted Secondary structure 




........







.








.....

Query SS confidence 

















. . . . . . . .






















.






















. . . . .

Query Sequence  QRAVDMAAQLGADALILA. . . . . . . . DLAMLEYAAERYPHIERHVSVQA. SATNEEAINFYHRHFDVARVVLP. . . . . RV
Query Conservation     
  
   
 
 


 ........
 
             
  
   .

 
           
   
 

..... 
Alig confidence 

















........






















.






















.....

Template Conservation    

      
 

 


 
  

 

      

  
    







   
   

  
  

  






   
 
Template Sequence  LEDVRTVRELGFPGLVTGVLDVDGNVDXPRXEKIXAAAGPLAVTFHRAFDXCANPLYTLNNLAELGIARVLTSGQKSDAL
Template Known Secondary structure  TT
S

B
TTSSB
TTS
GGGGG
S
T


TTSSSTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   144.....150.........160......
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  LSIHQVKQLARVTPVPLEVFAFG
Query Conservation 
 
 

  
       


 


Alig confidence 
















.




Template Conservation   
   
  
   
    .

 

Template Sequence  QGLSKIXELIAHRDAPI. IXAGA
Template Known Secondary structure  TTTSSS

.S
Template Predicted Secondary structure 



.

Template SS confidence 






















   156...160.........170.. .....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions