Return to main results Retrieve Phyre Job Id

Job DescriptionP45527
Confidence85.32%DateThu Jan 5 12:02:54 GMT 2012
Rank298Aligned Residues145
% Identity16%Templated1r3sa_
SCOP infoTIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  LPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGA
Query Conservation 

   

  



 

 
       
           
 
        
  
 
 

 
            
  
   
 
Alig confidence 































































..













Template Conservation          
 


 
         


    

  
  
 
   
             


 

..     
      
 
Template Sequence  VPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAK. . DGHFALEELAQAGY
Template Known Secondary structure  TT
STTGGGS
TTT




T..T
GGGTTSS
Template Predicted Secondary structure 





















..




Template SS confidence 















































































   200.........210.........220.........230.........240.........250.........260... ......270.......
 
   90.........100......... 110.... .....120.........130... .. ....140.........150......
Predicted Secondary structure 





.
..







.......

...






Query SS confidence 



















.




. .


















. . . . . . .

. . .




















Query Sequence  DALILADLAMLEYAAERYPH. IERHV. . SVQASATNEEAINFYHRHF. . . . . . . DV. . . ARVVLPRVLSIHQVKQLARVT
Query Conservation 
 


 
 
           .  
  ..
   

 
           .......
 ...  
 

 

 
 

  
    
Alig confidence 



















.




..


















.......

...




















Template Conservation       
   

 
     
    
 




 

 

 


   
   
      
 

  

 

  

 


 
 
 

Template Sequence  EVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAV
Template Known Secondary structure  S

TTS

SSS
GGGGGS

SSSSS


TT

Template Predicted Secondary structure 































Template SS confidence 















































































   278.280.........290.........300.........310.........320.........330.........340.........350.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions