|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
. | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |
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| . | . | . |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . |  |
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|
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|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
. |
. |
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| . |
. |
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Query Sequence |   |
L | C | P | A | G | N | L | P | A | L | K | A | A | I | E | N | G | A | D | A | V | Y | I | G | L | K | D | D | T | N | A | . |
. |
. |
R | H | F | A | G | L | N | F | T | E | K | K | L | Q | E | A | V | S | F | V | H | Q | H | R | R | K | L | H | I | A | . |
. |
I | N | T | F | A | H | P | D | G | Y | A | R | W | Q |
Query Conservation |   |
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|   |
|   |
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|   |   |   |
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|   |   |
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|   |
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|   |
|   |   |   |   |   |   |   | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   | . | . |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . |
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| . | . | . |
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| . | . |
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|
Template Conservation |   |
  |
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|   |   |   |
|   |   |   |
|   |
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|   |
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|
| . | . |
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|   |   |
|   |   |   |
|   |   |
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|   |
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|   |
|   |   |
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|   |
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|   |   |   |
|   |
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|   |
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|   |   |
|   |
|   |
|   |
Template Sequence |   |
X | L | T | A | Y | E | S | S | F | A | A | L | X | D | D | A | G | V | E | X | L | L | V | G | . |
. |
D | S | L | G | X | A | V | Q | G | R | K | S | T | L | P | V | S | L | R | D | X | C | Y | H | T | E | C | V | A | R | G | A | K | N | A | X | I | V | S | D | L | P | F | G | A | Y | Q | Q | S | K | E | Q | A | F |
Template Known Secondary structure |   |
 |  |  |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| . | . | T | T |  |  |  |  | T | T |
|
| S | S | S | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |
|
| T | T | S | S | S | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
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|
|  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |
| . | . |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
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|
|
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
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|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
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|
|
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|
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|
|
|
|
| . |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
R | A | V | D | M | A | A | Q | L | G | A | D | A | L | I | L | . |
. |
. |
. |
A | D | L | A | M | L | E | Y | A | A | E | R | Y | P | H | I | E | R | H | V | S | V | Q | A | S | A | T | N | . |
. |
. |
. |
. |
. |
. |
. |
E | E | A | I | N | F | Y | H | R | H | F | D | V | A | R | V | V | L | P | R | V | L | S | I |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|   |
|   |
|
|
| . | . | . | . |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
| . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
|   |
|
Alig confidence |   |
|
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|
|
| . | . | . | . |
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|
| . | . |
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|
| . | . | . | . | . | . | . | . |
|
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|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . |
|
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |
| . |
|
|
|
|
|
|
|
|
|
|
|   | . |
|
|   |
Template Sequence |   |
A | A | A | A | E | L | X | A | A | G | A | H | X | V | K | L | E | G | G | V | W | X | A | E | T | T | E | F | L | Q | X | R | . |
. |
G | I | P | V | C | A | H | I | G | L | T | P | Q | S | V | F | A | K | A | Q | A | L | L | N | D | A | K | A | H | . |
D | D | A | G | A | A | V | V | L | X | E | C | . |
V | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| S | G | G | G |  |  |  |  |  |  |  |  |  | T | . | . | T |
|
|  |  |  |  |  |  | S |
| G | G | G | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  | T | T |
| S |  |  |  |  |  | S | . |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  | . |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | |
170 | . | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Q | V | K | Q | L | A | R | V | T | P | V | P | L | E | V | F | A | F | G | S | L | C |
Query Conservation |   |
  |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|
Template Sequence |   |
E | L | A | K | K | V | T | E | T | V | S | C | P | T | I | G | I | G | A | G | A | D | C |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  | S | S |
| S |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
184 | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . |
  |