Job Description P45527 Confidence 85.93% Date Thu Jan 5 12:02:54 GMT 2012 Rank 289 Aligned Residues 118 % Identity 10% Template d1h6za1 SCOP info TIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate phosphate dikinase, C-terminal domain Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																																													.	.	.	.	.	30	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	L	L	C	P	A	G	N	L	P	A	L	K	A	A	I	E	N	G	A	D	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	G	L	K	D	D	T	N	A	R	H
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	V	R	T	N	A	D	T	P	A	D	A	A	K	A	R	S	F	G	A	E	G	V	G	L	C	R	T	E	H	M	F	F	E	G	S	R	I	N	F	I	R	E	M	I	L	A	D	S	A	S	G	R	K	A	A	L	D	K	L	L	P	I	Q	R	A	D	F	V	G	I	L	R	A	M	R	G	L	P
Template Known Secondary structure		S							S	S									T	T	T			S					B		S	G	G	G	S	T	T	T										S		S	S																								T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		559	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
		37	.	.	40	.	.	.																																																										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	G	L	N	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	I	R	L	L	D	P	P	L	H	E	F	V	P	H	D	A	A	A	Q	F	E	L	A	Q	K	L	G	M	P	A	E	K	V	R	N	R	V	N	A	L	H	E	L	N	P	M	L	G	H	R	G	C	R	L	G	I	T	Y	P	E	I	Y	N	M	Q	V	R	A	I	I	E	A	A	I	A	V	S	E
Template Known Secondary structure									S		G	G	G	G			S	S		S	S	T	T	T	T	S		S	S	S												S	S			S	S	S	T	T	S	S									S	T	T																		T
Template Predicted Secondary structure
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.
		60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.											90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	.	.	.	.	.	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	L	G	A	.	.	.	.	.	.	.	.	.	.	D	A	L	I	L	A	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	S
Query Conservation			.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																						.
Template Sequence		E	G	S	S	V	I	P	E	I	M	V	P	L	V	G	K	K	E	E	L	S	L	I	R	E	E	V	V	K	T	A	E	A	V	I	T	K	S	G	K	R	V	H	Y	T	V	G	T	M	I	E	V	P	R	A	A	V	T	A	D	S	I	A	Q	K	A	D	F	.	F	S	F	G	T	N
Template Known Secondary structure		T	T														S																						S		S												S						T					T	T	T		S		.					T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		719	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.		.	.	.	790	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions