Job Description P45527 Confidence 80.26% Date Thu Jan 5 12:02:54 GMT 2012 Rank 362 Aligned Residues 129 % Identity 18% Template c9rubB_ PDB info PDB header:lyase(carbon-carbon) Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase; PDBTitle: crystal structure of activated ribulose-1,5-bisphosphate2 carboxylase complexed with its substrate, ribulose-1,5-3 bisphosphate Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																															.
Query SS confidence																							.	.	.	.																															.
Query Sequence		L	C	P	A	G	N	L	P	A	L	K	A	A	I	E	N	G	A	D	A	V	.	.	.	.	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	E	K	K	L	Q	E	A	V	S	F	V	.	H	Q	H	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	Q
Query Conservation																							.	.	.	.																															.
Alig confidence																			.				.	.	.	.														.	.	.	.	.	.												.													.	.
Template Conservation																			.																					.	.	.	.	.	.																									.	.
Template Sequence		L	R	P	K	P	F	A	E	A	C	H	A	F	W	L	G	G	.	D	F	I	K	N	D	E	P	Q	G	N	Q	P	F	A	P	L	R	D	T	.	.	.	.	.	.	I	A	L	V	A	D	A	M	R	R	A	Q	D	E	T	G	E	A	K	L	F	S	A	N	.	.	I	T	A	D	D	P	F	E	I	I
Template Known Secondary structure																T	T		.	S						T	T		S		B	T	T	B						.	.	.	.	.	.																S	S								.	.				S	S
Template Predicted Secondary structure																			.																					.	.	.	.	.	.																									.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.
		79	80	.	.	.	.	.	.	.	.	.	90						.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.											120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.						.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.						.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	V	D	M	A	A	Q	L	G	A	D	.	.	.	.	.	A	L	I	L	A	.	.	.	.	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	S	.	.	.	.	.	.	.	.	.	.	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V
Query Conservation														.	.	.	.	.						.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.						.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	G	E	Y	V	L	E	T	F	G	E	N	A	S	H	V	A	L	L	V	D	G	Y	V	A	G	A	A	A	I	T	T	A	R	R	R	F	P	D	N	F	L	H	Y	H	R	A	G	H	G	A	V	T	S	P	Q	S	K	R	G	Y	T	A	F	V	H	C	K	M	A	R	L	Q	G	A	S	G	I	H
Template Known Secondary structure											S	G	G	G	G	G	G								S	S	S													S	S	S								T					S	S	S	S			S															T		S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		322	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions