Job Description P45527 Confidence 93.84% Date Thu Jan 5 12:02:54 GMT 2012 Rank 137 Aligned Residues 105 % Identity 27% Template c3ucqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:amylosucrase; PDBTitle: crystal structure of amylosucrase from deinococcus geothermalis Resolution 1.97 Å

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		8	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.									.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.
Predicted Secondary structure														.	.	.	.																		.	.	.	.	.	.							.	.	.	.	.	.	.	.																						.	.
Query SS confidence														.	.	.	.																		.	.	.	.	.	.							.	.	.	.	.	.	.	.																						.	.
Query Sequence		G	N	L	P	A	L	K	A	A	I	E	N	.	.	.	.	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	.	.	.	.	.	.	F	A	G	L	N	F	.	.	.	.	.	.	.	.	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	.	.	A	I	N	T
Query Conservation														.	.	.	.																		.	.	.	.	.	.							.	.	.	.	.	.	.	.																						.	.
Alig confidence														.	.	.	.								.	.									.	.	.	.	.	.							.	.	.	.	.	.	.	.																						.	.
Template Conservation																									.	.
Template Sequence		G	T	L	K	G	V	E	E	R	L	D	Y	L	E	G	L	G	V	K	Y	L	H	L	.	.	M	P	L	L	R	P	R	E	G	E	N	D	G	G	Y	A	V	Q	D	Y	R	A	V	R	P	D	L	G	T	M	D	D	L	S	A	L	A	R	A	L	R	G	R	G	I	S	L	V	L	D	L	V	L	N	H
Template Known Secondary structure		S	S						T	T							T	T							.	.								S	S			G	G	G	T	S									G	G	G																T	T										S
Template Predicted Secondary structure																									.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		68	.	70	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	R	E	H	A	W	A	Q	K	A	R	A	G	D	P	K	Y	R	A	Y	F	H	L	F	P	D	R	R	G	P	D	A	F	E	A	T	L	P	E	I	F	P	D	F	A	P	G	N	F	S	W	D	E	E	I	G	E	G	E	G	G	W	V	W	T	T	F	N	S	Y	Q	W	D	L	N	W	A	N	P
Template Known Secondary structure				T	T	S								T	T						T	T	B				S	S	S								T	T				S		T	T	T	S		S	S					T	T	S	S	S	S	S							S	S	S	T	T				B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																							.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	D	L	A	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	F	L	E	F	V	D	I	I	L	Y	L	A	N	R	G	V	E	V	F	R	L	D	A	I	A	F	I	W	K	R	L	G	T	D	C	Q	N	Q	P	E	V	H	H	L	T	R	A	L	R	A	A	A	R	I	V	A	P	A	V	A	F	K	A
Template Known Secondary structure																T	T	T							T	T	G	G	G	S				T	T	S		S	S	S																				T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions