Job Description P45527 Confidence 95.21% Date Thu Jan 5 12:02:54 GMT 2012 Rank 96 Aligned Residues 148 % Identity 15% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	P	A	L	K	A	A	I	E	N	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	.	.	.	.	.	.	.	.	.	.	.	H	F	A	G	L	N	F	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.							.	.	.	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																						.																										.	.	.
Template Sequence		S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	.	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	.	.	.	I	H	S	V	F	E	L	L	A	R	I	K	T	K	K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L
Template Known Secondary structure								T	G	G	G	S	S		S							.		S	S					S	S													T	T			.	.	.										T				S	S
Template Predicted Secondary structure																						.																										.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.																																																	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.																																																	.	.	.	.	.	.
Query Sequence		Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	D	L	.	.	.	.	.	.	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	S	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	P	R	V	L	S	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.																																																	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.										.	.																																						.	.	.	.	.	.
Template Conservation																																					.	.
Template Sequence		E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	.	.	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E
Template Known Secondary structure											T	T							T	T			G	G	G												.	.	T									T	T	S										T	T			S								S		S	S
Template Predicted Secondary structure																																					.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
						146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	I	H	Q	V	K	Q	L	A	R	V	T	P	V	P	L	E	V
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	N	L	P	I	F	V
Template Known Secondary structure														T	T			S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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