Job Description P45527 Confidence 93.43% Date Thu Jan 5 12:02:54 GMT 2012 Rank 145 Aligned Residues 136 % Identity 9% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		P	A	L	K	A	A	I	E	N	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	.	.	.	.	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	Q	R	A	V	D	M	A	A	Q
Query Conservation																																			.	.	.	.
Alig confidence																				.	.						.								.	.	.	.																							.	.	.													.	.	.
Template Conservation																				.	.						.																																		.	.	.													.	.	.
Template Sequence		H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	.	.	F	D	K	P	R	.	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	D	V	.	.	.	H	E	P	H	Q	C	Q	P	V	A	E	V	.	.	.	C	D	V
Template Known Secondary structure											T									.	.	S			T	T	.	S		T	T	S				S																									.	.	.		S											.	.	.		S
Template Predicted Secondary structure																				.	.						.																																		.	.	.													.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.				.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140											.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																		.	.																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																							.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	A	D	A	L	I	L	A	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	.	.	S	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	.	.	.	.	.	.	.	.	.	.	P	R	V	L	S	I	H	Q	V	K	Q	L	A	R
Query Conservation																																		.	.																							.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.											.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	.	.	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M	L	G	F	G	V	M	K	Q
Template Known Secondary structure						G	G	G	T	T												.	.										T	T	S		G	G	G											T	T														S	S	S						T
Template Predicted Secondary structure																						.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		155	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	C	G
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions