Job Description P45527 Confidence 89.37% Date Thu Jan 5 12:02:54 GMT 2012 Rank 243 Aligned Residues 144 % Identity 12% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		P	A	L	K	A	A	I	E	N	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	.	.	.	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	L
Query Conservation																																																	.	.	.
Alig confidence																										.	.	.	.	.	.																		.	.	.																	.	.	.	.
Template Conservation																										.	.	.	.	.	.																																					.	.	.	.
Template Sequence		N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	G	T	T	G	E	S	P	.	.	.	.	.	.	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	A	G	S	N	S	T	S	E	A	.	.	.	.	V	E	L	A	K	H	A	E	K	A
Template Known Secondary structure										T	T		S					S	S	T	T	T	T	G	G	.	.	.	.	.	.	G																		T	T	S	S		B							S	S					.	.	.	.										T
Template Predicted Secondary structure																										.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.									.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.											.	.										.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.											.	.										.	.	.	.
Query Sequence		G	A	D	A	L	I	L	A	D	L	.	.	.	.	.	.	.	.	A	M	L	E	Y	A	A	E	R	Y	.	.	P	H	I	E	R	H	V	S	V	.	.	.	.	Q	A	S	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	P	R	V	L	S	I	H	Q	V	K	Q	L	A
Query Conservation												.	.	.	.	.	.	.	.											.	.										.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.											.	.										.	.	.	.
Template Conservation
Template Sequence		G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	K	N	I	I	G	V	K	D	A	T	G	K	I	E	R	A	S	E	Q	R
Template Known Secondary structure		T		S									S	S																			S	S												S	S															T	T								S			T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	T	P	V	P	L	E	V	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	C	G	K	D	F	V	Q	L	S
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions