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Job Description | P45527 | Confidence | 66.32% | Date | Thu Jan 5 12:02:54 GMT 2012 |
Rank | 489 | Aligned Residues | 85 |
% Identity | 12% | Template | c3m07A_ |
PDB info |
PDB header:unknown function | Chain: A: PDB Molecule:putative alpha amylase; |
PDBTitle: 1.4 angstrom resolution crystal structure of putative alpha2 amylase from salmonella typhimurium.
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Resolution | 1.40 Å |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | P | A | L | K | A | A | I | E | N | G | A | D | A | V | Y | I | G | L | K | D | D | T | N | A | R | H | F | A | G | L | N | F | . |
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T | E | K | K | L | Q | E | A | V | S | F | V | H | Q | H | R | R | K | L | H | I | A | I | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | A | K | L | P | Y | L | A | E | L | G | V | T | V | I | E | V | M | P | V | A | Q | F | G | G | E | R | G | W | G | Y | D | G | V | L | L | Y | A | P | H | S | A | Y | G | T | P | D | D | F | K | A | F | I | D | A | A | H | G | Y | G | L | S | V | V | L | D | I | V | L | N | H | F | G | P | E | G | N | Y | L | P |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
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66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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N | T | F | A | H | P | D | G | Y | A | R | W | Q | R | A | V | D | M | A | A | . |
Q | L | G | A | D | A | L | I | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | L | A | P | A | F | F | H | K | E | R | M | T | P | W | G | N | G | I | A | Y | D | V | D | A | V | R | R | Y | I | I | E | A | P | L | Y | W | L | T | E | Y | H | L | D | G | L | R | F |
Template Known Secondary structure |   |
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| G | G | G |  |  |  |  |  |  |  | T | T |  |  |  |  |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
213 | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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