Job Description P45527 Confidence 74.95% Date Thu Jan 5 12:02:54 GMT 2012 Rank 417 Aligned Residues 74 % Identity 19% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	.	.	.	.	.	.	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	S	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	P	R	V	L	S	I	H	Q	V	K	Q
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																			.	.	.	.													.
Template Conservation																																												.	.	.	.													.
Template Sequence		E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y	E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	.	.	.	.	A	R	A	H	Y	D	D	E	V	A	Y	I	.	T	E	R	G	A	N	Q	V	V	X	G	E	R	E	I	A	R	T	X	L	E
Template Known Secondary structure								T	T	G	G	G		S							S																	S	S	S				.	.	.	.				S	S								.			T	T		S
Template Predicted Secondary structure																																												.	.	.	.													.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.					.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
		152	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	T	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		546	.	.	.	550

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions