Job Description P45527 Confidence 96.67% Date Thu Jan 5 12:02:54 GMT 2012 Rank 38 Aligned Residues 180 % Identity 16% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		14	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.													.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	A	I	E	N	G	A	D	A	V	Y	.	.	.	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	A	I	.	.	.	.	.	.	.	.	.	.	.	.	N	T	F	A	H	P	D	G	Y	A	R	W	Q
Query Conservation														.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.			.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		R	S	Y	I	E	S	G	S	D	V	I	L	T	N	T	F	G	.	A	T	R	M	K	L	R	K	H	G	L	E	D	K	L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	G	E	K	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	L	F	E	E	F	Y	E	N	F	R
Template Known Secondary structure								T		S					S		T	T	.		S					G	G	G	T		G	G	G																	T	T	S										S			B	T	T	T	S	S	B
Template Predicted Secondary structure																			.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.					.	140
Predicted Secondary structure																	.	.	.							.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence																	.	.	.							.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	.	.	.	L	A	D	L	A	M	.	.	.	.	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	S	.	.	.	.	.	.	.	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	.	.	.	.	V	L
Query Conservation																	.	.	.							.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.
Alig confidence																	.	.	.							.	.	.	.																					.	.	.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		E	T	V	E	I	M	V	E	E	G	V	D	G	I	I	F	E	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	D	I	D	A	L	G	I	N	C	S	L
Template Known Secondary structure											T		S																									S	S	S										T	T	S			T	T	S												T	S	S		S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		P	R	V	L	S	I	H	Q	V	K	Q	L	A	R	V	T	P	V	P	L	E	V	F	A	F	G	S	L	C	I	M	S	E	G	R	C	Y	L	S	S	Y	L	T	G	E	S	P	N	T	.	I	G	A	C	S
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		G	P	E	E	I	L	P	I	F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	Y	P	L	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G	V	N	I	F	G	G	C	C	G
Template Known Secondary structure															T	T			S																			T	T						T	T	T		S						T	T
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions