 |
Job Description | P45527 | Confidence | 95.99% | Date | Thu Jan 5 12:02:54 GMT 2012 |
Rank | 64 | Aligned Residues | 119 |
% Identity | 14% | Template | c3bg3B_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:pyruvate carboxylase, mitochondrial; |
PDBTitle: crystal structure of human pyruvate carboxylase (missing2 the biotin carboxylase domain at the n-terminus)
|
Resolution | 2.80 Å |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | A | L | K | A | A | I | E | N | G | A | D | A | V | Y | I | G | L | K | D | D | T | N | A | R | H | F | A | G | L | N | F | T | E | K | K | L | Q | E | A | V | S | F | V | H | Q | H | R | R | K | L | H | I | A | I | N | T | F | . |
. |
. |
. |
. |
. |
. |
A | H | P | D | G | Y | A | R | W | Q | R | A | V | D | M |
Query Conservation |   |
|   |   |   |
|
|   |   |
|
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |
| . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |
|
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |
|   |   |
Template Sequence |   |
K | F | C | E | V | A | K | E | N | G | M | D | V | F | R | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | D | S | L | N | Y | L | P | N | M | L | L | G | M | E | A | A | G | S | A | G | G | V | V | E | A | A | I | S | Y | T | G | D | V | A | D | P | S | R | T | K | Y | S | L | Q | Y | Y | M | G | L | A | E | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
|
|
|
| S |
| T | T |
| T | T |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
661 | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | Q | L | G | A | D | A | L | I | L | A | D | L | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | L | E | Y | A | A | E | R | Y | P | H | I | E | R | H | V | S | V | Q | A | S | A | T | N | E | E | A | I | N | F | Y | H | R | H | F | D | V | A | R | V | V | L | P |
Query Conservation |   |
|   |   |   |
|   |
|   |
|
|
|   |
|   |
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|   |
|   |
| . |
|
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |
|
|   |   |   |
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|
|   |
|
Template Sequence |   |
L | V | R | A | G | T | H | I | L | C | I | . |
D | M | A | G | L | L | K | P | T | A | C | T | M | L | V | S | S | L | R | D | R | F | P | D | L | P | L | H | I | H | T | H | D | T | S | G | A | G | V | A | A | M | L | A | C | A | Q | A | G | A | D | V | V | D | V | A |
Template Known Secondary structure |   |
 |  |  |  | T |
| S |  |  |  |
| . |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |
|  |  |  |
|
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | B |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
730 | . | . | . | . | . | . | . | . | . | 740 | |
. | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|