Job Description P45527 Confidence 93.89% Date Thu Jan 5 12:02:54 GMT 2012 Rank 134 Aligned Residues 86 % Identity 23% Template c2wcsA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha amylase, catalytic region; PDBTitle: crystal structure of debranching enzyme from nostoc2 punctiforme (npde) Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.												.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query SS confidence															.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Query Sequence		A	G	N	L	P	A	L	K	A	A	I	E	N	.	.	.	.	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	.	.	.	.	.	.	.	.	.	.	.	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	A	I	N	.	.	.	.	.
Query Conservation															.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Alig confidence															.	.	.	.								.	.																.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.
Template Conservation																										.	.
Template Sequence		G	G	D	L	W	G	I	M	E	D	L	D	Y	I	Q	N	L	G	I	N	A	I	Y	F	.	.	T	P	I	F	Q	S	A	S	N	H	R	Y	H	T	H	D	Y	Y	Q	V	D	P	M	L	G	G	N	E	A	F	K	E	L	L	D	A	A	H	Q	R	N	I	K	V	V	L	D	G	V	F	N	H	S	S
Template Known Secondary structure		S									T								T							.	.	S						S	T	T		T	T	S									G	G	G	T															T	T										S	B
Template Predicted Secondary structure																										.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
																																																						67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	A	H	P	D	G	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	F	F	F	F	H	D	V	L	E	N	G	P	H	S	P	W	V	N	W	F	K	I	E	G	W	P	L	S	P	Y	N	G	E	F	P	A	N	Y	V	G	W	A	G	N	R	A	L	P	E	F	N	H	D	N	P	E	V	R	E	Y	I	M	E	I	A	E	Y	W	L	K	F	G	I	D	G	W	R	L
Template Known Secondary structure		T	T	S										G	G	G		T	T	G	G	G	B		B		S	S	S			S	S			S	S			S	B		B	G	G	G		T	T	S	B	B	B		T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions