Job Description P45527 Confidence 91.48% Date Thu Jan 5 12:02:54 GMT 2012 Rank 200 Aligned Residues 77 % Identity 16% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		P	A	L	K	A	A	I	E	N	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	.	.	.	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	L
Query Conservation																																																	.	.	.
Alig confidence																										.	.	.	.	.	.																		.	.	.																					.	.	.	.
Template Conservation																										.	.	.	.	.	.																																									.	.	.	.
Template Sequence		A	L	I	D	D	L	I	K	A	G	V	D	G	L	F	F	L	G	S	G	G	E	F	S	.	.	.	.	.	.	Q	L	G	A	E	E	R	K	A	I	A	R	F	A	I	D	H	V	D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	T	I	E	L	S	.	.	.	.	Q	H	A	Q	Q	A
Template Known Secondary structure										T	T		S					S	S	T	T	T	T	G	G	.	.	.	.	.	.	G	S																	T	T	S	S								S	S										.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.																																									.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	D	A	L	I	L	A	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	D	G	I	V	V	I	N	P
Template Known Secondary structure		T		S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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