Job Description P45527 Confidence 80.17% Date Thu Jan 5 12:02:54 GMT 2012 Rank 363 Aligned Residues 111 % Identity 11% Template c2q5cA_ PDB info PDB header:transcription Chain: A: PDB Molecule:ntrc family transcriptional regulator; PDBTitle: crystal structure of ntrc family transcriptional regulator from2 clostridium acetobutylicum Resolution 1.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																		.	.	.																											.	.	.	.	.																				.
Query SS confidence																		.	.	.																											.	.	.	.	.																				.
Query Sequence		M	E	L	L	C	P	A	G	N	L	P	A	L	K	A	A	.	.	.	I	E	N	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	.	.	.	.	.	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	.	H	I	A	I	N	T	F	A	H	P
Query Conservation																		.	.	.																											.	.	.	.	.																				.
Alig confidence																		.	.	.																											.	.	.	.	.																				.
Template Conservation
Template Sequence		F	I	P	I	T	K	T	A	S	L	T	R	A	S	K	I	A	F	G	L	Q	D	E	V	D	A	I	I	S	R	G	A	T	S	D	Y	I	K	K	S	V	S	I	P	S	I	S	I	K	V	T	R	F	D	T	M	R	A	V	Y	N	A	K	R	F	G	N	E	L	A	L	I	A	Y	K	H	S	I	V	D
Template Known Secondary structure																						T	T	T		S														T	T		S	S																				G	G	G		S								S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		72	.																		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																.	.
Template Conservation																																						.																.	.
Template Sequence		K	H	E	I	E	A	M	L	G	V	K	I	K	E	F	L	F	S	S	E	D	E	I	T	T	L	I	S	K	V	K	T	E	N	I	K	.	I	V	V	S	G	K	T	V	T	D	E	A	I	K	Q	.	.	G	L	Y	G	E	T
Template Known Secondary structure										T										S	G	G	G											T	T			.															T	.	.	T
Template Predicted Secondary structure																																						.																.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions