Job Description P45527 Confidence 69.08% Date Thu Jan 5 12:02:54 GMT 2012 Rank 468 Aligned Residues 105 % Identity 6% Template c2pjuD_ PDB info PDB header:transcription Chain: D: PDB Molecule:propionate catabolism operon regulatory protein; PDBTitle: crystal structure of propionate catabolism operon2 regulatory protein prpr Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.						.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure														.																						.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.
Query SS confidence														.																						.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.
Query Sequence		L	P	A	L	K	A	A	I	E	N	G	A	.	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	.	.	.	.	.	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	.	H	I	A	I	N	T	F	A	H	P	D	G	.	.	.	.	.	.	.	.	.
Query Conservation														.																						.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.
Alig confidence														.																						.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	T	Y	I	R	K	K	L	A	N	E	R	C	D	A	I	I	A	A	G	S	N	G	A	Y	L	K	S	R	L	S	V	P	V	I	L	I	K	P	S	G	Y	D	V	L	Q	F	L	A	K	A	G	K	L	T	S	S	I	G	V	V	T	Y	Q	E	T	I	P	A	L	V	A	F	Q	K	T	F	N	L	R
Template Known Secondary structure										T	T				S														T	T		S	S																			T	T		T	T	S								S	S													T
Template Predicted Secondary structure
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
										74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																		.																.	.
Template Conservation																											.																.	.
Template Sequence		L	D	Q	R	S	Y	I	T	E	E	D	A	R	G	Q	I	N	E	L	K	A	N	G	T	E	.	A	V	V	G	A	G	L	I	T	D	L	A	E	E	A	.	.	G	M	T	G	I	F	I	Y	S
Template Known Secondary structure								S	S														T	T			.					S										T	.	.	T	S					S	S
Template Predicted Secondary structure																											.																.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions