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Job Description | P45527 | Confidence | 80.92% | Date | Thu Jan 5 12:02:54 GMT 2012 |
Rank | 349 | Aligned Residues | 111 |
% Identity | 10% | Template | c2nvaH_ |
PDB info |
PDB header:lyase | Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; |
PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine
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Resolution | 1.80 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
F | T | E | K | K | L | Q | E | A | V | S | F | V | H | Q | H | . |
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R | R | K | L | H | I | A | I | N | T | F | A | H | P | D | G | Y | A | R | W | Q | R | A | V | D | M | A | A | Q | L | G | A | D | A | L | I | L | A | D | L | A | M | L | E | Y | A | A | E | R | Y | P | H | I | E | R | H | V | S | V | Q | A | S |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | S | P | K | I | V | E | D | L | I | D | Q | W | T | I | L | F | P | R | V | T | P | H | Y | A | V | K | C | N | N | D | . |
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E | V | L | L | K | T | M | C | D | K | N | V | . |
N | F | D | C | A | S | S | S | E | I | K | K | V | I | Q | I | G | V | S | P | S | R | I | I | F | A | H | T | M |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
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120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
A | T | N | E | E | A | I | N | F | Y | H | R | H | F | D | V | A | R | V | V | L | P | R | V | L | S | I | H | Q | V | K | Q | L | A | R | V | T | P | V | P | L | E | V |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | T | I | D | D | L | I | F | A | K | . |
D | Q | . |
G | V | D | I | A | T | F | D | S | S | F | E | L | D | K | I | H | T | Y | H | P | N | C | K | M | I | L | R | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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94 | . | . | . | . | . | 100 | . | . | . | |
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. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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