Return to main results Retrieve Phyre Job Id

Job DescriptionP45527
Confidence71.86%DateThu Jan 5 12:02:54 GMT 2012
Rank443Aligned Residues129
% Identity17%Templatec2gq8A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:oxidoreductase, fmn-binding; PDBTitle: structure of sye1, an oye homologue from s. ondeidensis, in complex2 with p-hydroxyacetophenone
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20......... 30.........40...... ...50....... ..60........
Predicted Secondary structure 






.........











....
..




......
Query SS confidence 



















. . . . . . . . .
















. . . .










. .










. . . . . .
Query Sequence  LPALKAAIENGADAVYIGLK. . . . . . . . . DDTNARHFAGLNFTEKK. . . . LQEAVSFVHQH. . RRKLHIAINTF. . . . . .
Query Conservation 

   

  



 

 
  .........     
           ....
 
        ..
  
 
 

 
......
Alig confidence 



















.........
















....










..










......
Template Conservation    

  
  








 





 




  
 







 


 

  


  

  

   
 


       

Template Sequence  RQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGT
Template Known Secondary structure  TT
S

TTSSGGG



STTSSST
GGG
SS

TTS
Template Predicted Secondary structure 
































Template SS confidence 















































































   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   6970.........80.........90...... ...100.........110.........120.........130........
Predicted Secondary structure 







..........














Query SS confidence 



























. . . . . . . . . .









































Query Sequence  AHPDGYARWQRAVDMAAQLGADALILAD. . . . . . . . . . LAMLEYAAERYPHIERHVSVQASATNEEAINFYHRHFDVARV
Query Conservation              
  
   
 
 


 
.......... 
             
  
   

 
           
   
Alig confidence 



























..........










.







...


















Template Conservation                 
   


 
 

                 

   .  


  
...    
 

  
  
  
 
Template Sequence  VDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAY. QGVLIYAG. . . RYNAEKAEQAINDGLADMI
Template Known Secondary structure 

SST
S

BTTB





.
SS...S

TTS
S
Template Predicted Secondary structure 

















.




...







Template SS confidence 















































































   244.....250.........260.........270.........280.........290.. .......300 .........310.........
 
   139140..
Predicted Secondary structure 

Query SS confidence 



Query Sequence  VLPR
Query Conservation   

 
Alig confidence 



Template Conservation    

Template Sequence  GFGR
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 



   320...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions