Job Description P45527 Confidence 73.30% Date Thu Jan 5 12:02:54 GMT 2012 Rank 432 Aligned Residues 99 % Identity 12% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.													.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	R	W	Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	.	.	.	.	.	.	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	I	A	N	L	A	S	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	R	L	N	S	E	F	S	G	F	T	V	V	G	D	A	A	E	F	E	T	L	K	E	C	G	M	E	K	A	D	M	V	F	A	F	T	N	D	D	S	T	N	F	F	I	S	M	N	A	R	Y	M	F	N	V
Template Known Secondary structure											T	T								S		G	G	G	G	G	G	S		T	T			S					S		T	T	S						T	T	T	G	G	G		S						S	S															T	S
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	R	H	V	S	V	Q	A	S	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	P	R	V	L	S	I	H	Q	V	K	Q	L
Query Conservation
Alig confidence								.	.	.	.											.							.
Template Conservation								.	.	.	.											.							.
Template Sequence		E	N	V	I	A	R	.	.	.	.	V	Y	D	P	E	K	I	K	I	F	.	E	E	N	G	I	K	.	T	I	C	P	A	V	L	M	I	E	K	V	K	E	F
Template Known Secondary structure		S						.	.	.	.		S	S	G	G	G					.		T	T	T			.
Template Predicted Secondary structure								.	.	.	.											.							.
Template SS confidence
		100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions