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Job DescriptionP45527
Confidence94.42%DateThu Jan 5 12:02:54 GMT 2012
Rank120Aligned Residues87
% Identity24%Templatec1wzaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-amylase a; PDBTitle: crystal structure of alpha-amylase from h.orenii
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10......... 20.........30.........40... ......50.........60..
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Query Sequence  PAGNLPALKAAIEN. . . . . . . . . . . . GADAVYIGLKDDTNARHFAGLNFT. . . . . . . . . . . EKKLQEAVSFVHQHRRKLH
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Template Sequence  GIGDLKGIIEKLDYLNDGDPETIADLGVNGIWL. . MPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVI
Template Known Secondary structure  S


T

S
TT

SS


S..



SSSS

S
S
GGG

TT
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   4950.........60.........70.........80. ........90.........100.........110.........120......
 
   63 ..... .70.......
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Query Sequence  I. . AINTF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AHPDGYARW
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Template Sequence  IDLPINHTSERHPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKV
Template Known Secondary structure 


SB

TTST
TT
TTGGGB
B

S




B
SSS
B
STT
SS
TTS
BB
TTS
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   127..130.........140.........150.........160.........170.........180.........190.........200......
 
   78.80.........90....
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Query Sequence  QRAVDMAAQLGADALIL
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Template Sequence  IGIAKYWLKQGVDGFRL
Template Known Secondary structure  TT

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   207..210.........220...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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