Job Description P45527 Confidence 97.91% Date Thu Jan 5 12:02:54 GMT 2012 Rank 6 Aligned Residues 144 % Identity 20% Template c1vliA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution Resolution 2.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	A	L	K	A	A	I	E	N	G	A	D	A	.	.	.	.	.	.	.	.	.	.	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	Q	R
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																											.	.	.							.	.	.	.	.
Template Conservation																																																																				.	.	.							.	.	.	.	.
Template Sequence		F	A	L	I	D	A	A	A	E	A	G	A	D	A	V	K	F	Q	X	F	Q	A	D	R	X	Y	Q	K	D	P	D	V	S	I	F	S	L	V	Q	S	X	E	X	P	A	E	W	I	L	P	L	L	D	Y	C	R	E	K	Q	V	I	F	L	S	T	V	.	.	.	C	D	E	G	S	A	.	.	.	.	.
Template Known Secondary structure												T		S							B		G	G	G	G	T	S											G	G	G	B	S	S		G	G	G											T	T						B		.	.	.		S					.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.							.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140											.	.
Predicted Secondary structure																		.	.	.	.	.																												.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.																												.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	.	.	.	.	.	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	S	A	T	N	.	.	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	.	.	.	.	.	.	.	.	.	.	P	R
Query Conservation																		.	.	.	.	.																												.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.															.	.	.	.	.												.	.															.	.								.											.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																															.	.																								.
Template Sequence		.	.	D	L	L	Q	S	T	S	P	S	A	F	K	I	A	S	Y	E	I	N	H	L	P	L	L	K	Y	V	A	R	L	.	.	N	R	P	X	I	F	S	T	A	G	A	E	I	S	D	V	H	E	A	W	R	T	I	.	R	A	E	G	N	N	Q	I	A	I	X	H	C	V	A	K	Y	P	A	P	P	E
Template Known Secondary structure		.	.					T	T			S						G	G	G	T	T										T	T	.	.		S							T	T														.		T	T	T											S	S	S	S			G	G
Template Predicted Secondary structure		.	.																															.	.																								.
Template SS confidence
				116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	S	I	H	Q	V	K	Q	L	A	R	V	T	P	V	P	L	E	V	F	A	F	G	S	L	C	I	M	S	E	G	R
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	N	L	S	V	I	P	X	L	A	A	A	.	.	.	.	.	.	.	.	.	F	P	E	A	V	I	G	F	S	D	H
Template Known Secondary structure		G			T	T									.	.	.	.	.	.	.	.	.	S	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.										.	.	.	.	.	.	210	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions