Job Description P45527 Confidence 79.38% Date Thu Jan 5 12:02:54 GMT 2012 Rank 371 Aligned Residues 84 % Identity 12% Template c1tufA_ PDB info PDB header:lyase Chain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from m.2 jannaschi Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	A	V	D	M	A	A	Q	L	G	A	D	A	L	I	L	A	D	L	A	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V	S	V	Q	A	S	A	T	N	E	E	A	I	N	F	Y	H	R	H	F	D	V	A	R	V	V	L	P	R	V	L	S	I	H	Q	V	K	Q	L	A	R	V	T	P
Query Conservation
Alig confidence														.																									.															.
Template Conservation														.																									.															.
Template Sequence		L	A	I	T	R	L	L	A	K	L	G	C	.	G	A	D	V	V	S	G	G	E	L	Y	I	A	K	L	S	N	V	P	S	K	K	I	V	.	F	N	G	N	C	K	T	K	E	E	I	I	M	G	.	I	E	A	N	I	R	A	F	N	V	D	S	I	S	E	L	I	L	I	N	E	T	A	K	E	L	G
Template Known Secondary structure											T	T		.						S										T	T			G	G	G			.				S											.			T	T		S																					T
Template Predicted Secondary structure														.																									.															.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		158	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	L	E	V	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	A	N	V	A	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions