Job Description P45527 Confidence 84.43% Date Thu Jan 5 12:02:54 GMT 2012 Rank 308 Aligned Residues 81 % Identity 15% Template c1m7xC_ PDB info PDB header:transferase Chain: C: PDB Molecule:1,4-alpha-glucan branching enzyme; PDBTitle: the x-ray crystallographic structure of branching enzyme Resolution 2.30 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																											.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	N	T	F	A	H	P	D	G	Y	A	R	W	Q
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	A	P	T	R	R	F	G	.	.	.	.	.	.	.	.	.	T	R	D	D	F	R	Y	F	I	D	A	A	H	A	A	G	L	N	V	I	L	D	W	V	P	G	H	F	P	T	D	D	F	A	L	A	E	F	D	G	T	N	L	Y	E	H	S	L	I	Y	N	Y	G	R	R	E	V	S	N	F	L	V
Template Known Secondary structure							T	T	S		.	.	.	.	.	.	.	.	.															T	T									S	S	S				S	T	T	S	S	T	T	G	G	G	T	T	S	S	S									S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.										.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		79	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100																	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	A	V	D	M	A	A	Q	L	.	G	A	D	A	L	I	L	A	D	L	A	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V
Query Conservation											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	N	A	L	Y	W	I	E	R	F	G	I	D	A	L	R	V	D	A	V	A	S	M	I	Y	R	E	N	L	E	A	I	E	F	L	R	N	T	N	R	I	L	G	E	Q	V	S	G	A	V	T	M	A
Template Known Secondary structure										T	T																																				S	T	T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions