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Job DescriptionP45527
Confidence86.91%DateThu Jan 5 12:02:54 GMT 2012
Rank277Aligned Residues52
% Identity15%Templatec1jd7A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-amylase; PDBTitle: crystal structure analysis of the mutant k300r of2 pseudoalteromonas haloplanctis alpha-amylase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   43......50.........60... .....
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Query Sequence  TEKKLQEAVSFVHQHRRKLHI. . AINTF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHESCTINNSDYGNDRYRVQNCELVGL
Template Known Secondary structure 
TT

S
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BTTS
BTTB
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GGGB



B


SBBTTB
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   63......70.........80.........90.........100.........110.........120.........130.........140..
 
   6970.........80.........90....
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Query Sequence  . . . . . AHPDGYARWQRAVDMAAQLGADALIL
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Template Sequence  ADLDTASNYVQNTIAAYINDLQAIGVKGFRF
Template Known Secondary structure  B
TTST

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   143......150.........160.........170...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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