Job Description P45527 Confidence 80.87% Date Thu Jan 5 12:02:54 GMT 2012 Rank 351 Aligned Residues 105 % Identity 22% Template c1ea9D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:cyclomaltodextrinase; PDBTitle: cyclomaltodextrinase Resolution 3.2 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query SS confidence														.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Query Sequence		G	N	L	P	A	L	K	A	A	I	E	N	.	.	.	.	G	A	D	A	V	Y	I	G	L	K	D	D	T	N	A	R	H	F	A	G	L	N	F	.	.	.	.	.	.	.	.	.	.	.	T	E	K	K	L	Q	E	A	V	S	F	V	H	Q	H	R	R	K	L	H	I	A	I	N	T	.	.	.	.	.
Query Conservation														.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Alig confidence														.	.	.	.								.	.															.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.
Template Conservation																									.	.
Template Sequence		G	D	L	Q	G	V	I	D	H	L	D	H	L	S	K	L	G	V	N	A	V	Y	F	.	.	T	P	L	F	K	A	T	T	N	H	K	Y	D	T	E	D	Y	F	Q	I	D	P	Q	F	G	D	K	D	T	L	K	K	L	V	D	L	C	H	E	R	G	I	R	V	L	L	D	A	V	F	N	H	S	G	R
Template Known Secondary structure				S						T		T	T	T	T	T	T	T							.	.								S	S	S	T	T	S		S							T	T	T															T	T	T										S	B			T
Template Predicted Secondary structure																									.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
																																																				68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	H	P	D	G	Y	A	R	W	Q	R	A	V	D	M	A	A	Q	.	L	G	A	D	A	L	I	L	A	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation
Template Sequence		T	F	P	P	F	V	D	V	L	K	N	G	E	K	S	K	Y	K	D	W	F	H	I	R	S	L	P	L	E	V	V	D	G	I	P	T	Y	D	T	F	A	F	E	P	L	M	P	K	L	N	T	E	H	P	D	V	K	E	Y	L	L	K	A	A	E	Y	W	I	R	E	T	G	I	D	G	W	R	L	D	V
Template Known Secondary structure		T	S										T	T	T		G	G	G	G	G	B		B	S	S	S	S				S	S	S	S		S	B		B	S	S	S		T	T		B	B	B		T	T	S																			T							T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		97	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.
Query Sequence		L	A	.	.	.	.	.	.	.	.	.	M	L	E	Y	A	A	E	R	Y	P	H	I	E	R	H	V
Query Conservation				.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	E	V	S	H	Q	F	W	R	E	F	R	R	V	V	K	Q	A	N	P	D	A	Y	I	L	G
Template Known Secondary structure		G	G	G	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions