Job Description P08200 Confidence 100.00% Date Thu Jan 5 11:00:54 GMT 2012 Rank 18 Aligned Residues 326 % Identity 30% Template d1wpwa_ SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.80

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	I	P	Y	I	E	G	D	G	I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T	P
Query Conservation
Alig confidence																																.	.	.																						.	.
Template Conservation																																.	.	.																						.	.
Template Sequence		F	T	V	A	L	I	Q	G	D	G	I	G	P	E	I	V	S	K	S	K	R	I	L	A	K	I	N	E	L	Y	.	.	.	S	L	P	I	E	Y	I	E	V	E	A	G	D	R	A	L	A	R	Y	G	E	.	.	A	L	P	K	D	S	L	K	I	I	D	K	A	D	I	I	L	K	G	P	V	G	E	S
Template Known Secondary structure										S	T	T																			T	.	.	.	T											S							S	S	S	.	.	S	S										T		S									T	T
Template Predicted Secondary structure																																.	.	.																						.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W	K	A	D	S	A	D	A	E	K	V	I	K	F	L	R	E	E	M	G	V	K
Query Conservation
Alig confidence		.	.	.	.																																.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	A	A	D	V	V	V	K	L	R	Q	I	Y	D	M	Y	A	N	I	R	P	A	K	S	I	P	G	I	D	T	K	Y	.	.	.	G	N	V	D	I	L	I	V	R	E	N	T	E	D	L	Y	K	G	F	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.											T	T	T												T	T	T			S		.	.	.	S											S	S	B	T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L	I	D	G	G	P	W	L	K	V
Query Conservation
Alig confidence		.	.																																	.																													.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																	.																													.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	I	V	S	D	G	V	A	V	G	M	K	I	I	T	R	F	A	S	E	R	I	A	K	V	G	L	N	F	A	L	R	R	.	R	K	K	V	T	C	V	H	K	A	N	V	M	R	I	T	D	G	L	F	A	E	A	C	R	S	V	L	.	.	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.				T	T							B																			T	T	.	T	S								T	T	T		T	T														.	.	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																	.																													.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	P	N	T	G	K	E	I	V	I	K	D	V	I	A	D	A	F	L	Q	Q	I	L	L	R	P	A	E	Y	D	V	I	A	C	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G	I	A	P	G	A	N	I	G	D	E	C	A	L	F	E	A	T	H	G	T	A	P	K	Y	A
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	G	K	V	E	Y	S	E	M	Y	V	D	A	A	A	A	N	L	V	R	N	P	Q	M	F	D	V	I	V	T	E	N	V	Y	G	D	I	L	S	D	E	A	S	Q	I	A	G	S	L	G	I	A	P	S	A	N	I	G	D	K	K	A	L	F	E	P	V	H	G	A	A	F	D	I	A
Template Known Secondary structure		.	.	.	.	.	.	T	T	S																		G	G	G		S																					T		G	G	G								S	S							S	S				T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.								.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.																				.
Query SS confidence																								.	.	.	.	.	.	.																				.
Query Sequence		G	Q	D	K	V	N	P	G	S	I	I	L	S	A	E	M	M	L	R	H	M	G	.	.	.	.	.	.	.	W	T	E	A	A	D	L	I	V	K	G	M	E	G	A	I	N	A	K	.	T	V	T	Y	D	F	E	R	L	M	D	G	A	K	L	L	K	C	S	E	F	G	D	A	I	I	E	N	M
Query Conservation																								.	.	.	.	.	.	.																				.
Alig confidence																								.	.	.	.	.	.	.																				.							.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.
Template Sequence		G	K	N	I	G	N	P	T	A	F	L	L	S	V	S	M	M	Y	E	R	M	Y	E	L	S	N	D	D	R	Y	I	K	A	S	R	A	L	E	N	A	I	Y	L	V	Y	K	E	R	K	A	L	T	P	D	V	.	.	.	.	.	.	G	G	N	A	T	T	D	D	L	I	N	E	I	Y	N	K	L
Template Known Secondary structure		T	S	S				T																	T	T			T																					S	S			G	G	G	.	.	.	.	.	.	T															S
Template Predicted Secondary structure																																																									.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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