Job Description P08200 Confidence 100.00% Date Thu Jan 5 11:00:54 GMT 2012 Rank 9 Aligned Residues 342 % Identity 27% Template d1v53a1 SCOP info Isocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases Resolution 2.85

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	I	I	P	Y	I	E	G	D	G	I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T
Query Conservation
Alig confidence																																	.	.	.																						.	.
Template Conservation																																	.	.	.																						.	.
Template Sequence		K	M	K	L	A	V	L	P	G	D	G	I	G	P	E	V	M	D	A	A	I	R	V	L	K	T	V	L	D	N	D	.	.	.	G	H	E	A	V	F	E	N	A	L	I	G	G	A	A	I	D	E	A	G	T	.	.	P	L	P	E	E	T	L	D	I	C	R	R	S	D	A	I	L	L	G	A	V	G	G
Template Known Secondary structure											S	T	T																	T	T	S	.	.	.	S											T								S	S	.	.	S	S										T	S	S
Template Predicted Secondary structure																																	.	.	.																						.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		106	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.																											.	.								.	.
Query SS confidence								.	.	.	.	.	.																											.	.								.	.
Query Sequence		P	V	G	G	G	I	.	.	.	.	.	.	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	.	.	P	S	P	V	K	H	P	.	.	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W	K	A	D	S	A	D	A	E	K	V
Query Conservation								.	.	.	.	.	.																											.	.								.	.
Alig confidence								.	.	.	.	.	.																											.	.								.	.																											.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		P	K	W	D	H	N	P	A	S	L	R	P	E	K	G	L	L	G	L	R	K	E	M	G	L	F	A	N	L	R	P	V	K	A	Y	A	T	L	L	N	A	S	P	L	K	R	E	R	V	E	N	V	D	L	V	I	V	R	E	L	T	G	G	L	Y	F	G	R	P	S	E	R	R	G	P	.	.	.	.	.
Template Known Secondary structure		G	G	G	S	S	S		G	G	G														T												G	G	G	T	T	T	S	S	S						T	T										S	S	B	T	T	T		S						S	S	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	F	L	R	E	E	M	G	V	K	K	I	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.																	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	N	E	V	V	D	T	L	A	Y	T	R	E	E	I	E	R	I	I	E	K	A	F	Q	L	A	Q	I	R	.	R	K	K	L	A	S	V	D	K	A	N	V	L	E	.	S	S	R	M	W	R	E	I	A	E	E	T	A	K	K	Y	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T								B																				T	.	T	S								T	T	T			.														T	T		.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.															.																	.	.	.
Template SS confidence
																	152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		E	L	I	D	G	G	P	W	L	K	V	K	N	P	N	T	G	K	E	I	V	I	K	D	V	I	A	D	A	F	L	Q	Q	I	L	L	R	P	A	E	Y	D	V	I	A	C	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G	I	A	P	G	A	N	I	.	G	D	E	C	A	L
Query Conservation																																																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	V	E	L	S	H	M	L	V	D	S	T	S	M	Q	L	I	A	N	P	G	Q	F	D	V	I	V	T	E	N	M	F	G	D	I	L	S	D	E	A	S	V	I	T	G	S	L	G	M	L	P	S	A	S	L	R	S	D	R	F	G	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S																		G	G	G		S																	T	T	T	T	S		T	T	S								S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.		.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		F	E	A	T	H	G	T	A	P	K	Y	A	G	Q	D	K	V	N	P	G	S	I	I	L	S	A	E	M	M	L	R	H	.	M	G	W	T	E	A	A	D	L	I	V	K	G	M	E	G	A	I	N	A	K	T	V	T	Y	D	F	E	R	L	M	D	G	A	K	L	L	K	C	S	E	F	G	D	A	I	I
Query Conservation																																		.
Alig confidence																																		.																												.	.
Template Conservation																																																														.	.
Template Sequence		Y	E	P	V	H	G	S	A	P	D	I	A	G	Q	G	K	A	N	P	L	G	T	V	L	S	A	A	L	M	L	R	Y	S	F	G	L	E	K	E	A	A	A	I	E	K	A	V	D	D	V	L	Q	D	G	Y	C	T	G	D	L	.	.	Q	V	A	N	G	K	V	V	S	T	I	E	L	T	D	R	L	I
Template Known Secondary structure					S	S				G	G	G	T	T	S	S																																						T	T			S	S	S	S	.	.			T	T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		414	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		353	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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