Job Description P08200 Confidence 100.00% Date Thu Jan 5 11:00:54 GMT 2012 Rank 24 Aligned Residues 369 % Identity 21% Template c3us8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of an isocitrate dehydrogenase from sinorhizobium2 meliloti 1021 Resolution 2.25 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	T	L	Q	N	G	K	L	N	V	P	E	N	P	I	I	P	Y	I	E	G	D	G	I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.																						.	.
Template Conservation								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.																						.	.
Template Sequence		K	I	K	V	A	N	.	.	.	.	.	.	.	.	.	P	V	V	E	L	D	G	D	E	X	T	R	I	I	W	Q	F	I	K	D	K	L	I	H	P	.	.	.	.	.	.	.	Y	L	D	L	D	L	E	Y	Y	D	L	G	V	E	N	R	D	A	T	D	D	.	.	Q	V	T	I	D	A	A	N	A	I
Template Known Secondary structure							S	.	.	.	.	.	.	.	.	.																							T	T	T	.	.	.	.	.	.	.	T																		T	T	T	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.																						.	.
Template SS confidence
		3	.	.	.	.	.										.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.
Query Sequence		R	E	Y	R	V	A	I	K	G	P	L	T	T	P	.	.	.	.	.	.	.	.	.	V	G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I
Query Conservation																.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																											.														.
Template Conservation																																																			.														.
Template Sequence		K	K	H	G	V	G	V	K	C	A	T	I	T	P	D	E	G	R	V	E	E	F	K	L	K	K	X	W	K	S	P	N	G	T	I	R	N	I	L	G	G	V	I	F	R	E	P	I	I	.	C	K	N	V	P	R	L	V	P	G	W	T	K	.	P	I	I	V	G	R	H	A	F	G	D	Q	Y	R	A	T
Template Known Secondary structure					S																			T		S	S															S									.		T	T	S			S	S	T	T			S	.									S	S	G	G	G	G
Template Predicted Secondary structure																																																			.														.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		E	W	K	A	D	S	A	D	A	E	K	V	I	K	F	L	R	E	E	M	G	V	K	K	I	.	.	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F
Query Conservation																											.	.
Alig confidence																											.	.																																				.
Template Conservation																																																																.
Template Sequence		D	F	K	F	P	G	K	G	K	L	S	I	K	F	V	G	E	D	G	Q	T	I	E	H	D	V	Y	D	A	P	G	A	G	V	A	L	A	X	Y	N	L	D	E	S	I	T	E	F	A	R	A	S	F	N	Y	G	L	Q	R	K	V	P	.	V	Y	L	S	T	K	N	T	I	L	K	A	Y	D	G	R	F
Template Known Secondary structure							S	S										T	T	S											S	S																													T			.							T	T	T	S	T	T
Template Predicted Secondary structure																																																																.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L	I	D	G	G	P	W	L	K	V	K	N	P	N	T	G	K	E	I	V	I	K	D	V	I	A	D	A	F	L	Q	Q	I	L	L	R	P	A	E	Y	D	V	I	A	C	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		K	D	I	F	Q	K	V	F	D	E	E	F	A	A	Q	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	L	W	Y	E	H	R	L	I	D	D	X	V	A	S	A	L	K	W	S	G	G	Y	.	V	W	A	C	K	N	Y	D	G	D	V	Q	S	D	I	V	A	Q	G	F	G	S	L	G
Template Known Secondary structure													T							.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																		S					.																					S		T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.														240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure												.	.																					.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence												.	.																					.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		I	A	P	G	A	N	I	G	D	E	.	.	C	A	L	F	E	A	T	H	G	T	A	P	K	Y	A	G	Q	D	K	V	.	.	.	.	.	.	N	P	G	S	I	I	L	S	A	E	M	M	L	R	H	M	G	W	T	E	.	.	.	.	.	.	.	A	A	D	L	I	V	K	G	M	E	G	A	I	N	A
Query Conservation												.	.																					.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence												.	.																					.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	X	T	S	V	L	X	T	P	D	G	K	T	V	E	A	E	A	A	H	G	T	V	T	R	H	Y	R	Q	H	Q	K	G	E	E	T	S	T	N	S	I	A	S	I	F	A	W	T	R	G	L	A	H	R	A	K	L	D	G	N	A	E	L	A	K	F	S	E	T	L	E	R	V	C	V	D	T	V	E	S
Template Known Secondary structure		S								T	T	S									S												T	T																										T																					T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		387	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		K	T	V	T	Y	D	F	.	E	R	L	M	D	G	A	K	L	L	K	C	S	E	F	G	D	A	I	I	E	N	M
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		G	F	X	T	K	D	L	A	L	L	I	G	P	D	Q	P	W	L	S	T	T	G	F	L	D	K	I	D	E	N	L
Template Known Secondary structure		T			B									T	T				B
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.