Job Description P08200 Confidence 11.12% Date Thu Jan 5 11:00:54 GMT 2012 Rank 92 Aligned Residues 67 % Identity 21% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	.	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L	I	D	G	G	P	W	L	K	V	K	N	P	N	T	G	K	E	I	V	I	K	D	V	I	A	D	A	F	L	Q	Q	I	L
Query Conservation																				.
Alig confidence																				.							.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	R	E	V	L	R	H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	.	.	.	.	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q
Template Known Secondary structure							T	T		T	T									S							.	.	.	.											G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G		T	T						S								T
Template Predicted Secondary structure																											.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.																					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		291	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	P	A	E	Y	D	V	I	A	C	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	P	D	N	T	Y	D	V	V	I	I	D
Template Known Secondary structure		S		T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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