Job Description P08200 Confidence 100.00% Date Thu Jan 5 11:00:54 GMT 2012 Rank 25 Aligned Residues 356 % Identity 20% Template c2uxqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase native; PDBTitle: isocitrate dehydrogenase from the psychrophilic bacterium2 desulfotalea psychrophila: biochemical properties and3 crystal structure analysis Resolution 1.75 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	P	E	N	P	I	I	P	Y	I	E	G	D	G	I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.																						.	.
Template Conservation																																		.	.	.	.	.	.	.																						.	.
Template Sequence		M	K	I	Q	M	K	T	P	L	V	E	L	D	G	D	E	M	T	R	V	L	W	P	L	I	K	D	K	L	L	L	P	.	.	.	.	.	.	.	F	I	D	L	Q	T	E	Y	Y	D	L	G	I	E	E	R	D	R	T	N	D	.	.	Q	I	T	I	D	A	A	E	A	I	K	K	Y	G	V	G	V	K
Template Known Secondary structure				B			S	S																							T	T	T	.	.	.	.	.	.	.	T	B										S							T	T	T	.	.														S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																						.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		101	.	.	.	.	.										.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		G	P	L	T	T	P	.	.	.	.	.	.	.	.	.	V	G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W	K	A	D	S	A	D
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																											.												.
Template Conservation																																											.												.
Template Sequence		N	A	T	I	T	P	N	Q	D	R	V	E	E	Y	G	L	K	E	Q	W	K	S	P	N	A	T	V	R	A	M	L	D	G	T	V	F	R	K	P	I	M	.	V	K	N	I	K	P	S	V	R	S	W	.	Q	K	P	I	V	V	G	R	H	A	Y	G	D	F	Y	K	N	A	E	I	F	A	E	A	G	G
Template Known Secondary structure																T		S	S																								.		T	T	B			S	S	T	T		.		S									S		G	G	G	G							T	T
Template Predicted Secondary structure																																											.												.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		A	E	K	V	I	K	F	L	R	E	E	M	G	V	K	K	I	.	.	.	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L
Query Conservation																			.	.	.
Alig confidence							.												.	.	.																																			.
Template Conservation							.																																																	.
Template Sequence		K	L	E	I	V	.	V	T	D	K	N	G	K	E	T	R	Q	T	I	M	E	V	D	E	P	A	I	V	Q	G	I	H	N	T	V	A	S	I	G	H	F	A	R	A	C	F	E	Y	S	L	D	Q	K	I	.	D	C	W	F	A	T	K	D	T	I	S	K	Q	Y	D	Q	R	F	K	I	I	F	E	E	I
Template Known Secondary structure							.				T	T												S	S																													T		.								T	T	T		T	T
Template Predicted Secondary structure							.																																																	.
Template SS confidence
		150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		249		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.							.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure			.																										.	.	.	.	.	.
Query SS confidence			.																										.	.	.	.	.	.
Query Sequence		A	.	R	E	E	F	G	G	E	L	I	D	G	G	P	W	L	K	V	K	N	P	N	T	G	K	E	.	.	.	.	.	.	I	V	I	K	D	V	I	A	D	A	F	L	Q	Q	I	L	L	R	P	A	E	Y	D	V	I	A	C	M	N	L	N	G	D	Y	I	S	D	A	L	A	A	Q	V	G	G	I	G
Query Conservation			.																										.	.	.	.	.	.
Alig confidence			.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.																							.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Sequence		F	A	Q	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	K	F	A	A	A	G	I	E	Y	F	Y	T	L	I	D	D	V	V	A	R	M	M	K	T	E	G	G	M	.	L	W	A	C	K	N	Y	D	G	D	V	M	S	D	M	V	A	S	A	F	G	S	L	A
Template Known Secondary structure						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T																T	T					S	.																					T		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		228	.	230	.	.																					.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		322	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure										.																							.	.	.	.	.	.																					.	.	.	.	.	.	.
Query SS confidence										.																							.	.	.	.	.	.																					.	.	.	.	.	.	.
Query Sequence		I	A	P	G	A	N	I	G	.	D	E	C	A	L	F	E	A	T	H	G	T	A	P	K	Y	A	G	Q	D	K	V	.	.	.	.	.	.	N	P	G	S	I	I	L	S	A	E	M	M	L	R	H	M	G	W	T	E	.	.	.	.	.	.	.	A	A	D	L	I	V	K	G	M	E	G	A	I	N	A	K
Query Conservation										.																							.	.	.	.	.	.																					.	.	.	.	.	.	.
Alig confidence										.																							.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	M	S	S	V	L	V	S	P	Y	G	Y	F	E	Y	E	A	A	H	G	T	V	Q	R	H	Y	Y	Q	H	L	K	G	E	R	T	S	T	N	P	V	A	L	I	Y	A	W	T	G	A	L	R	K	R	G	E	L	D	G	T	P	D	L	C	A	F	C	D	S	L	E	A	I	T	I	E	C	I	E	S	G
Template Known Secondary structure		S								T	T	S								S												T	T																										T																					T	T
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.									.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		T	V	T	Y	D	F	E	R	L	M	D	G	A	K	L	L	.	.	.	.	.	.	.	.	K	C	S	E	F	G	D	A	I	I	E	N	M
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.					.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		Y	M	T	G	D	L	.	.	.	.	.	.	A	R	I	C	E	P	A	A	I	K	V	L	D	S	I	E	F	I	D	E	L	G	K	R	L
Template Known Secondary structure								.	.	.	.	.	.		T	T	B	S	S			S
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		367	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.